Oncorhynchus masou masou (cherry salmon): 135550246
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Entry
135550246 CDS
T10723
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135550246
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135550246
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135550246
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omm04090
]
135550246
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135550246
Protein kinases [BR:
omm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135550246
CD molecules [BR:
omm04090
]
Proteins
135550246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
Ig_PDGFR_d4
C2-set_2
V-set
VEGFR-1-like_Ig-like
SpaA_4
Motif
Other DBs
NCBI-GeneID:
135550246
NCBI-ProteinID:
XP_064836935
LinkDB
All DBs
Position
12:complement(48789305..48816276)
Genome browser
AA seq
978 aa
AA seq
DB search
MLFLALLLGIMVCCTAQEQSPPVIKLNSVVLREAVWTIPVGTSSFTLTCEGYSTVTWSTT
AFKLMRKTRLGSVITTRRLTVDYTGTYKCMYENQPDLISEVHIYVKDPHNILVTPRTLGD
VKEGSDVLLCQLTNPIATDLSVRMANGDPTPPDMNFTVNPKRGILIRYLLTSHSADYVCS
AKINGVTKVSKVVPIFVIQSLCLPPSVLIEVNGYVRIVGEQLLIPCITSNPNHFYNVTWK
HSSLKVLDFSHKMIQEDQSNQVHITSSVTIPAVAMSHTGNFTCTAMNEAGFNSSTTYLQV
VDKPYMRLIPRLSPDLYLNGSLVEVNEGENLEINIQIEAYPQIKEQWWDIPMSHNHNIST
HDDTWAVRFNNRYESSLLLQRVRSEERGQYTLHTRSACLNGSITFNVQVYQKPSAMVRLK
NVTTLTCTASGYPAPTILWYQCPGIQNTCDGDNDTVEVQPLLTSTMEVQSELTLSPSSIE
VTVECVTFNLVGKERDIFVLRVPAATLPTFVTPKLFTPTFIGATSTATLLFLLLVIVLYK
YKQKPKYEVRWKIIEANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEA
TAYGLGTDDNMTTRVAVKMLKPSAHSEEREALMSELKILSHLGCHDNIVNLLGACTQGGP
MLMITEYCSYGDLLNFLHGKAKLFLYSIPSGPGTPEDPRVPENRDHYKNTCAQESRVRSD
SGISCSSSDNFLEMHPAQRPKHCPMVSLCEDPETGTWSLDIEDLLRFSSQVAQGMDFLAS
KNCIHRDVAARNVLLTDGRVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFECV
YTVKSDVWSYGILLWEIFSLGKSPYPNVVVDNRFYKMIKDGCYMSQPDFAPPEIYTIMKM
CWNLEPTERPTFSTIGQLIQRLLPDQPDHTYRNVQDKTPQQGAGEQGDPAKTNGDCDQTL
NQEGEEEPLMKKNNYQFC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctagcccttctcctgggcatcatggtctgctgcacagcccaagagcagagc
cctccagtgatcaagctgaactcggtggtgctgagggaggctgtgtggactatccctgtt
ggaacctcatctttcacattgacctgtgaagggtacagcacagtcacctggtcaaccaca
gcattcaaactcatgaggaaaactagattggggagtgtgattaccaccaggcgccttaca
gtagactacactggaacatacaagtgcatgtatgagaaccaaccagacctcatctcagag
gtccacatctatgtgaaagatccccataacatcttggtgacccctcgaaccctgggagat
gtgaaggagggcagtgatgttctcctctgtcagctgacaaaccccatagccaccgaccta
tctgtccgtatggccaacggagaccctacaccccctgacatgaacttcactgtcaaccca
aagagaggaatcctcatccgataccttctgaccagccacagcgcagactacgtctgcagt
gcaaagatcaatggggtcactaaagtctccaaagttgtccccatcttcgtcattcaaagc
ttgtgtttgccaccatctgtgctaattgaggtaaatgggtatgttcgtattgttggagag
cagctcctgatcccctgcattaccagcaaccctaaccacttctacaacgtgacgtggaaa
cactcctccctcaaagtattggacttttcacataaaatgatacaagaggaccagagtaat
caagtgcacatcaccagtagtgtgactatcccagctgtggccatgtctcacacaggaaac
ttcacctgtacagccatgaatgaggctgggttcaacagctccaccacctacctgcaggtt
gtagataagccttacatgaggctcataccccgcctgtcaccagatctctacttaaatggc
tccttagttgaagtgaacgaaggagaaaaccttgagataaacattcagatcgaggcgtat
ccccaaatcaaggagcagtggtgggacatccccatgtctcacaatcacaacatctccact
catgacgacacatgggccgtccgattcaataacaggtacgagagcagcttgctgctacag
agagtgaggtctgaggagagaggccagtacaccctccacaccaggagcgcatgcctcaat
ggctccatcaccttcaatgtccaagtctaccagaaacccagtgccatggtcagactgaag
aatgttaccaccctgacctgcaccgcctctggatacccagctcccacaatcctctggtac
cagtgcccaggaatacaaaacacgtgtgatggtgataatgacaccgtggaggtgcagcct
cttctcaccagcaccatggaggtgcagagtgagctgaccctcagtccctcaagtatagag
gtcacagtggagtgtgtgacctttaacctggttggtaaagagcgggacatcttcgtattg
cgtgtccctgctgcgacattaccaacatttgtaacacccaagctgttcacacccactttc
attggagccaccagcacagcaacccttctgttccttctgcttgtcatcgtcctgtacaaa
tacaagcagaaaccaaaatatgaagtccggtggaagatcattgaggccaatgatgggaat
aactacacctttattgaccctacacaacttccttataacaagaagtgggagttccctcgt
gacaagctgaggcttggccagattctgggagcaggggcttttgggaaagtagtggaggcc
actgcctatggtctggggacagatgacaacatgaccacgcgcgtggcagtaaagatgctc
aagccaagcgcccactccgaagagagagaagctctgatgtcagagctgaagatcctcagt
cacctgggatgtcatgacaacattgttaacctgttaggggcgtgtactcaaggaggccca
atgctgatgatcacggagtactgcagctatggcgacctgctgaacttcttgcatggcaag
gccaagctgttcctgtactccatcccgagcggaccagggactccagaggatccacgggtt
ccagagaaccgtgatcactacaagaacacatgtgcacaggagtcccgtgtaaggagtgac
agtgggatctcctgctccagctcagacaacttcctggaaatgcatccagcgcagagaccg
aaacactgtcctatggtttccctatgtgaggatccagagacaggcacctggtcgctggac
attgaagacttgttgaggttctcctctcaggtggctcagggaatggacttcctggcatcc
aaaaattgcattcacagggacgtggcggctaggaacgtcctcttgaccgatggccgtgtg
gctaagatctgcgacttcggcctcgccagagacatcgagaatgactccaactatgtggtg
aaaggaaatgcccgtctgccagtgaagtggatggcccctgagagcatctttgaatgtgtg
tacacagtgaagagtgacgtctggtcctatgggatactgctgtgggagatcttctctctg
ggtaagagcccataccctaatgttgtggtggacaaccggttctacaagatgatcaaagat
ggatgctacatgtctcagccagactttgcccctccagaaatatacaccatcatgaaaatg
tgctggaacctggaaccaacagagcgtccaaccttcagtaccatcggccaacttatccaa
aggctactgcctgaccagccagaccatacctacaggaatgtgcaggataagactccacag
cagggggcaggagagcagggggacccagctaagacgaatggggattgtgatcagacactg
aaccaggagggagaggaggagcccctgatgaaaaagaacaactaccagttctgctga
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