Oncorhynchus masou masou (cherry salmon): 135550350
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Entry
135550350 CDS
T10723
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
omm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135550350
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135550350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550350
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135550350
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
135550350
NCBI-ProteinID:
XP_064837136
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Position
1:73726103..73730021
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AA seq
467 aa
AA seq
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MAAKAADGGGATDLIDIYDEKFSQNNGEDGDFPTTAEASDLYDDVLTGSVSRERKFSENA
MPLSKDQPTKEESKPAILYTYSGVWNKRLAVYVGNFSWWTSDKDLINVARTLGVKDIVEI
KFAENRANGQSRGYAEVVVATEESLQRLLETLPNCHVNGEKVDCRFATRQNLAVFEAQAN
KRVPQRSNSKESSDTGDKNTSVSPPVLNQNHSTVPHTIHPQHIHNKPPPLSVPYFRLPPP
LFPHLPPHIPPPPMPHLFPPPPLRLPSHPPPSLHLNPAFFPPAQHDNYSQQHNTPYNRHS
SRDSEAPTPQMPEGEFDELMNRNRAIASSAITKAVSGATAGDMPLAIETLLTAIAVIKQS
RVYGDERCRALVTSLKDCLFSIESKSYGSRKRHRSRDREHRSRDRERDRERERDRGRERE
ESYSQEWEAAGMSRRHRERSLSGERDGRDRERVRERDRHREHRERHR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaagcggccgatggtggtggtgcaactgacctcatagacatctacgacgag
aagttcagtcaaaacaacggggaggatggagattttccaacaacggcagaggcaagtgat
ctttatgatgacgtgctcactggctctgtgagccgggaaaggaaattctcagagaacgct
atgcctctcagcaaggaccagccgacgaaagaggagagcaaaccagcaatactgtacact
tacagtggagtgtggaacaagagactggctgtatatgtgggcaacttctcctggtggacc
tccgacaaagaccttattaacgtggcgcgcaccttgggtgtgaaggacattgtggagatc
aaatttgctgagaacagagctaatggccagtccaggggatacgctgaggtagtggtggcc
acagaagagtcattgcagaggttgctggagacattgccaaattgtcatgttaatggggaa
aaggtggactgccgctttgccacacgccagaatcttgccgtgtttgaagcccaggctaat
aaacgtgtcccccagcgctctaactcaaaggagtcgtcagatactggggataaaaacacc
tccgtctcccctcctgtgctcaaccagaaccactccactgtccctcacactatccacccc
caacacattcacaacaaacctccccctctgtcagtcccatactttaggctgcctcctcct
cttttccctcaccttcccccacacatccctcctccccccatgccccaccttttccctcca
ccacctctccgtctccccagccatcctccaccctccctgcatctcaaccccgccttcttt
cctccggcacaacatgacaactacagtcaacaacacaacacaccgtacaaccggcacagc
agcagggacagtgaagcgcccacaccccaaatgccagagggagagtttgatgagctgatg
aacagaaacagagcaatcgccagcagcgccatcaccaaggctgtgtctggagctactgct
ggagacatgcccctggcgattgagacgcttttgactgccattgctgtcatcaagcagtca
agagtgtatggggacgagcgctgtcgagcgctggtcacttctctgaaagactgcctcttt
tccattgagagcaagtcttacggctccaggaaaagacaccgttcccgtgacagagaacat
cgttcccgagatagagagcgggacagggaaagagagcgggacagaggcagggaaagggaa
gagtcctacagccaggaatgggaggctgcaggaatgtcccgccggcaccgagaacgctcc
ctaagtggggagagagatgggagagaccgggagcgtgttcgggaacgagatagacatagg
gagcatcgcgagcggcaccgctag
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