Oncorhynchus masou masou (cherry salmon): 135550412
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Entry
135550412 CDS
T10723
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03008
Ribosome biogenesis in eukaryotes
omm03013
Nucleocytoplasmic transport
omm03015
mRNA surveillance pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135550412
03015 mRNA surveillance pathway
135550412
03008 Ribosome biogenesis in eukaryotes
135550412
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135550412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550412
03009 Ribosome biogenesis [BR:
omm03009
]
135550412
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135550412
mRNA cycle factors
Stress granule specific factors
135550412
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
135550412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_8
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
135550412
NCBI-ProteinID:
XP_064837264
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All DBs
Position
12:complement(53796526..53810816)
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AA seq
632 aa
AA seq
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MSTADDSRYQNDHDDRVGGQTFRNRKGRGPFRAHMYSDQGPGAPGTRTRYRGGQKGSGGQ
GPRARFDDEDGDVAMTDSNSQDGSSQHRFNPYGRPNRRGDDRFDRGRRGGGGHRGRGNNR
GDGGGDGRNTWFKIFVPYGKKYDKDWLITALQSICSIPFTPVHYQVEGNRAQFYIDDSIT
ANALLKVSRKITDKEGYKVTVLMNPCPPPSFLQSELKPADLEHLKQCMAKRFDGSQQALD
LNNIRIDPDLVSQNIDVTLNRKNSMHAVIKIIEENIPELVCLNISNNKLFRLDDLSELVN
KAPNLKTLNLSHNEIKTERELDRIKGLKLVELWLERNPLCDYFKDQASYISTVRERFPRL
LKLDGQDLPPPIVFDVEVTPAALPPCKASYFCSEEIKTPILAFLQQYYSVYDSGDRQPLL
DAYHDGATFSLSMFITMQNPSRCSLGDYHKDTRNLKKLKDPSTRFRLLKHTRLNVVAFLN
ELPKTHHDTASLNVDVNTFTNTLLSFTVTGVFKEVEGKSRDSVRAFSRVFITVPAGGTSL
CIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLSAFSLKSGMNLEWSQK
CLQDNEWDFNRAGQVFTDLKAHGKIPDVAFIK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagccgacgattcacgttaccagaacgatcacgatgacagagttggaggacaa
acgtttcgcaaccgcaaaggcaggggtccttttagggcccatatgtatagtgaccagggg
ccaggagcaccagggacaagaacaagatatcgtggtggccaaaaaggtagtggcggccag
ggacccagagcgagatttgacgatgaggatggagatgtggcaatgacagacagcaactcc
caagatgggtcctcccaacacagatttaacccttacggaaggccgaatcgccgtggtgat
gaccgctttgatcgtggccgcagaggtggaggaggtcacaggggtcgtggtaataacaga
ggggatggaggtggagatggccgcaatacctggttcaagatatttgtcccctatggaaag
aaatatgacaaagactggctcataacagctctgcagagtatctgctctatacccttcacc
ccagtacattaccaagtagagggcaaccgagcacagttctatattgacgattccatcact
gcgaatgccttgttaaaggtatctcggaagatcacagacaaagaaggctacaaggtgact
gtactgatgaatccctgtcctccaccctcctttcttcagtctgaactaaagccagctgat
ctggagcacctaaagcaatgcatggctaaacgctttgatggctctcaacaagccctggac
ttgaacaacatccggatagacccagacctggtttcccagaacattgatgtgacattgaac
agaaagaactctatgcacgctgttattaagataattgaggagaacattccagagcttgtt
tgtctgaacatcagcaacaacaagctgtttaggctggatgacctgtcagagctggtcaac
aaggctccaaacttgaagacactcaatctttctcataatgagataaagacagagcgtgag
ctggataggatcaagggtcttaagctggtggagctatggctggagaggaatcccctttgc
gactatttcaaggaccaggcatcatacataagcacggtgagagagaggttccccaggctt
ctcaaactggatggtcaggatctcccccctcctatagtctttgatgtggaggtgactcct
gctgcccttccaccctgcaaggccagctacttctgctcagaagagatcaagactcccatc
ctcgccttcctacaacaatactacagtgtgtatgactccggggacagacaacctttgtta
gatgcctaccatgatggagcgaccttctccttaagcatgttcatcaccatgcagaaccca
tccaggtgcagtctcggagattaccataaagacactcggaacctgaaaaagctcaaagat
ccctccacacgattccgcttactgaagcacacccgtctgaatgtggtggctttcctaaac
gaactgcccaaaacgcaccatgacaccgcatcgctaaatgtggacgtcaacaccttcacc
aacacgttactgtcgttcacagtcactggagtgttcaaagaagttgaaggtaaatcccga
gactctgtcagagctttttctcgggtgttcatcacagtgccggctggagggacaagtctt
tgcatagtaaacgacgagctttttgttcgtaatgctacaactgaggagatccggcgggcc
tttgttgcacccgcccccacaccatccagcagccctgtccccaccctctcagctccccag
caagagatgctttctgccttctccctaaagtccggcatgaacctggaatggtcccagaaa
tgcctgcaggacaatgagtgggatttcaacagagcagggcaggtcttcacagaccttaag
gctcatggaaagatcccagatgtcgctttcataaagtga
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