KEGG   Oncorhynchus masou masou (cherry salmon): 135550416
Entry
135550416         CDS       T10723                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135550416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omm03041]
    135550416
   04121 Ubiquitin system [BR:omm04121]
    135550416
Spliceosome [BR:omm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    135550416
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135550416
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 135550416
NCBI-ProteinID: XP_064837269
LinkDB
Position
12:complement(53855919..53864845)
AA seq 785 aa
MGSSKKHKEKGRDKDAEERHREHKKHRHKEREKDKERNVTREREKRKRSRSKERSGRGSE
REGRSKGERSAGEPRVKKEKVEAGYQESPGIGPQSASGDASLSIEETNKLRAKLGLKPLE
MTDTTKELGTKEQPMVAETINPVYIKQQNEMREKLAAMKEKRLLNKKLGKVKTLAEGDWL
DDTVAWVERSRKMAKEKELAEKRAKLLQEMDEEFGVSNLVDEEFGQTKKAAYSSRDLKGL
TVQHRMESFNEGETVILTLQDQGVLEEEDDVLVNVGLVDKEKAEKNVELKKKKPDYKAYE
EDESVDDMATFKPRTVLGKYDEEIDGEKKKSFQLSKGGCAEGERERELQAIRETLRNQAQ
SLEMPALAIASEYYTPQEMVGFKKTKQRVRKIRKKALPDELQLDDTRNTDFGSRVRGRGR
RQLDEGQEVSKEGVIIPGLDVPQQSDDIRMADMDISDDEDFIPTEPAVLEEDEAEQDLQK
QLEKQRKLKQKQLEKQRKLKQKQLLQDSGEKVAEQVPWLARVDGSDDEDNKNNLNIVFNA
TSEFCRTLGDIPTYGLSGNREDQEDIMDFEQEAARDGAGGSDSDEDENVGWSIVNVDEEQ
KQPDFSTASTTILDEEPIVSSGLAAALALCKNKGLLDTQMQKISRVRAPTGALPNDNYSI
EDKMTIDDKYSRREEYRGFTQDFKEKDAYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHG
KGSGKMKTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNA
NNITK
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggggtcgtcgaagaaacataaggagaaagggcgtgataaggatgcagaagagcgtcac
cgcgaacacaaaaaacaccgtcacaaggagcgggagaaggacaaggaacgaaatgtcacc
cgagagagggagaagaggaaacggtccagatcgaaggaaaggagcggacggggttccgag
agagaaggtcgcagtaaaggcgaaaggagtgctggggagcctcgcgtaaagaaagaaaaa
gtggaggccggatatcaagagagtccaggaattggaccacagtctgcaagtggagatgcc
tcacttagcattgaagagacaaacaagctgagggccaaacttggtctgaagcctctggaa
atgactgacacaactaaagagctcggtacgaaggagcagccaatggttgcggagacgatc
aaccctgtgtacatcaaacagcagaacgagatgagggagaaactggcggctatgaaggag
aagaggctcctcaataagaaactggggaaagtgaagactttagcagaaggagactggctg
gatgacactgtagcttgggtggagaggagccggaagatggccaaagagaaagaactggca
gagaagagagccaaacttctgcaggagatggatgaggagtttggtgtgagcaatctggtg
gatgaggagtttggccagaccaagaaggccgcttacagttctcgggacctaaagggtctc
actgtgcagcataggatggagtcatttaatgaaggggagactgtcatcctcacactgcaa
gaccaaggtgtgcttgaagaggaggacgatgtacttgtaaacgtgggtctagtggacaaa
gaaaaggctgagaagaatgtggagttgaagaagaaaaagcctgattacaaagcttacgaa
gaggacgagagtgtcgatgacatggctacgttcaagccgcgcactgtgctgggcaagtat
gatgaggagattgatggagagaagaagaagagtttccagctgagcaaagggggctgtgct
gagggggaacgggaacgggagctgcaggccatccgggagaccctgaggaaccaggcccag
tccttggagatgcctgctctcgctattgcctcagagtactacacaccacaggagatggtg
ggctttaagaagaccaagcagcgtgtcaggaagatcaggaagaaggcgttgcctgacgag
ctccaactagacgacacgcgcaacaccgacttcggctccagggttcggggtcggggtcgc
aggcagttggatgagggccaggaggtgtcaaaggagggtgtcatcatacctggactagat
gtaccccaacagtcagatgacatcaggatggcagacatggacatcagtgacgatgaggac
ttcatccccactgagccggctgtgctggaggaggacgaggcagagcaagatctgcagaag
cagctggagaagcagaggaagctcaaacagaagcagctggagaagcagaggaagctcaaa
cagaagcagctgctccaagactctggagaaaaggtggcagagcaggtcccatggcttgca
agagtggatggcagtgatgacgaagacaacaagaacaacctgaacattgtatttaacgcc
acctctgagttctgcagaactctgggtgacatccccacctacggtctgtcaggaaacaga
gaggaccaggaggatatcatggatttcgaacaggaggcagcgagagatggggccggagga
tcagactcggatgaggatgagaacgttggctggagcatcgtcaacgtagatgaggaacag
aagcagcctgatttctccacagcatcaaccaccatcctggatgaagaacccattgtcagc
tctgggctggctgccgccttggcgctgtgcaagaataagggtctattggacactcaaatg
cagaagatatcccgtgtccgtgctcctaccggtgccctgcccaatgataactacagcatt
gaggacaagatgactatagatgacaagtacagtcggagggaggaatatagaggcttcacc
caggacttcaaggagaaggacgcctacaagcctgatgtcaagattgagtatgtggatgaa
tctgggcggaagctcactcccaaagaggctttccggcagctctcacatcggttccatggg
aaggggtctggcaagatgaagactgagaggaggatgaaaaagctggaagaggaagcgctg
ctgaagaagatgagcagtagtgatacccctctaggaacggtcgctttgcttcaggagaaa
cagaagtcacaaaaaaccccttacattgttctgagtgggagtgggaagagcatgaatgca
aacaacatcaccaaatag

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