Oncorhynchus masou masou (cherry salmon): 135550453
Help
Entry
135550453 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550453
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135550453
Surveillance factors
Other surveillance factors
135550453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
135550453
NCBI-ProteinID:
XP_064837321
LinkDB
All DBs
Position
12:complement(55034870..55052882)
Genome browser
AA seq
1039 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGGSVTSPPPSPAMPKSKLADYRYGRE
EMLALYIKDNKPPEDMQDKEFAAIMQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLMG
KGGGAAPVGVSRGRGGCIRGGRGRGRGEGAFYQRVPGGPDEGEVGFGRGREMLRSQSWDD
RAERPRFEKPNTCAEVVRPGFEEAGPPGRKDSWRADSDNWRTLREEEEEAAAAGGEQPAW
RVAGSRRDDGGPRSAGWRDRGGRRKFEFRDGEGPRRESDRDGLPEWCTDEEDGEMGTFDS
SGAFMCIKKDCKDTITEEDLEFEALEEEEENDQGGKDNNDDRDECEAAGEGEDKYKTPSP
PAISGSPPSDPLPAPCTTQAPISHPTKTNYVPSEGCPLPGSGAQLSPDPPSTTTSSLMPP
PSGSLLPSSGGEAEEDEGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHTITSHSHTH
PAPHSHTHAAGHTHSTHRDCALPLSHEAAMKWFYKDPQGDIQGPFSTVEMCEWFQAGYFT
MTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPXPPPLLVRQPPPSRGPSGNMDQELLKKH
LEQAATAALYQQLQMRFQHMNRSGDSSMMPSMNRSMSVPDNGSMWDMHTSASQQSGGEAN
LWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERKRQVEKRRQQEEQKRRDEEELY
RRKQQCRQQQELIMKLLQQAQPGAPGCVSGSGWSGSQASALSKQGKSLGLLELETERLLK
QQAQHQRAQHQRDRHGGLSMGQWGEGSVGMWSGGGMEPKGSSGGMGVWEEAVKNQNSLRN
MGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNS
SSSLDVATIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKQFLERRAKQKANHQRQQQQ
QQLSKEVSGLSNFPIQVGSVQSMFQAAQMGKGGMYDSQAVKMKKKQTMMLHSDPSILGYS
FLSAGDRMNLGEMETVEDY
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacctaaacttgaggctccgtgcactatccagaggggggagtgtgacgtcc
ccccctccttctccagccatgccaaagtccaagctggctgattaccgctatggccgcgag
gagatgctagcactttatataaaagataacaagcccccagaggacatgcaggataaggag
tttgctgctatcatgcaggatgagcctgtgcagcctttggccctggagcctctaactgag
gaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggctgatggga
aagggaggcggggctgcccctgtaggcgtttctaggggccgtggaggatgcatcagagga
ggtagagggagggggagaggtgaaggtgcgttctaccaaagagttcctggaggtcctgat
gaaggagaggtgggcttcggccgtggccgggaaatgctccgcagccaaagctgggatgac
cgagctgagaggccaaggtttgagaagccaaacacgtgtgctgaagtagtgcgtccaggg
ttcgaagaggctgggcctccgggcaggaaggactcttggcgtgctgacagcgacaactgg
cgtaccctccgagaggaggaggaagaggcagcagcagcaggaggggagcagccagcttgg
agagttgcaggatcccgccgggatgatggaggtcctcgttctgcaggctggcgtgatcgt
ggcggccggaggaagtttgaattccgtgacggcgagggcccccgcagggaatccgacagg
gacggccttcctgagtggtgcaccgacgaggaggatggagagatgggaacctttgactcc
tctggggccttcatgtgcatcaagaaagactgtaaggacaccatcactgaagaggatctg
gagtttgaagctctggaggaagaggaggagaatgatcagggaggcaaggacaacaacgat
gacagagatgaatgtgaagcagcaggtgagggagaagataagtacaagactccttctcct
cctgccatctctggctctccaccctcagaccctcttcctgccccctgcaccacacaggca
cccatctcccatcccaccaaaacaaactatgtgccctctgaaggctgcccacttccaggg
agtggtgcccagctcagcccagaccccccctccaccaccacttccagcctgatgcctcct
ccctctggatctctcctcccctcgtcagggggagaagcagaggaggacgagggcatgaag
cacctgcaacaggaggctgaaaagatggttgcctcactgcaggacacatcccttgaggag
gagtgtttcactcaagcactacaggagagccacacaatcacctctcactctcacacacac
ccagccccacactctcacacgcacgccgctggacacacacactcgacccatagggactgt
gccctgcccctctcccacgaggcagccatgaagtggttctacaaggatccccagggagat
atccaaggtcctttctccacggtggagatgtgtgagtggttccaggccggctacttcacc
atgaccctgctggtaaagaggggttgtgatgaaggcttccaacccctgggtgacgtcatc
aaaatgtggggccgcgtgcccttctcccccggccccntccccccgcccctcctggtgaga
cagcccccaccatctcgggggccctctggcaatatggaccaggagctgcttaagaaacat
ttggagcaggcagctactgcagctctataccagcaactacagatgaggttccagcacatg
aacaggagtggagattctagcatgatgccctcgatgaacaggtccatgtcagtacctgat
aatgggtccatgtgggacatgcatacctcggcctcccagcagtcaggtggtgaggccaac
ctatgggacttaaccatgagtcattccactcaggggccatctctggagcagcttcagaag
ctccaagaccggcgtgaggctgaactcagggccaagcgagaggaggaggagcgcaagcgg
caggtcgagaagaggaggcagcaggaggaacagaagaggcgtgatgaggaggagctgtac
aggcgtaagcagcagtgtcggcagcagcaggagctgatcatgaagctgctacagcaggcc
cagcccggggcaccagggtgtgtctctgggtcagggtggagcggctcccaggcctcagcc
ctctccaaacaaggcaagagcctcggcctgctggagctggagaccgaaaggctgctcaaa
cagcaggcccagcaccagagggcccagcatcagagagacaggcatggaggcttgtctatg
ggccagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggagcccaaaggc
agctctggagggatgggtgtctgggaggaggctgtgaagaaccaaaacagcctccgcaat
atgggcatgaagaacagccgcagcagcccatctctcagtgagcagtacatgctgaggaag
aagcgtacagaggaggaggacaagctgctgaaactgctgcagggcatgaagccccaggat
ggcttcaccacctggtgtgaacagatgctgcacgcactcaacacctctgctaacaattcc
tcctcctcactggacgtggcaaccatcgtggcctacctgaaggaggtggagtctccctac
gaggtccatgactttatccgctcctacctgggcgacaccatggaagccaaagagtttgcc
aagcagttcctggagcgccgagccaaacagaaagccaaccaccagagacaacagcagcaa
caacagctatcaaaggaagtttcagggctgtccaactttcctatccaggtaggctccgtc
cagtccatgttccaggcagcccagatgggaaagggaggaatgtatgacagtcaggctgta
aagatgaagaagaaacagaccatgatgcttcactctgaccctagcatcttaggatattca
ttcctgagcgctggggacaggatgaacctgggtgagatggaaacagtggaggattattga
DBGET
integrated database retrieval system
