Oncorhynchus masou masou (cherry salmon): 135550462
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Entry
135550462 CDS
T10723
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135550462
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135550462
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
MoCoBD_1
UbiD
Motif
Other DBs
NCBI-GeneID:
135550462
NCBI-ProteinID:
XP_064837351
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All DBs
Position
1:complement(74357299..74391924)
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AA seq
455 aa
AA seq
DB search
MQVSPGAKMPPLPQPPNNSGPISPSGLKNDKRSSSPVTQVKEEGTQPLNLSARPKTAELV
KSPTSPTHSLFTGSKTSPNSLSKSGIPSPLGGMGRGSSLDILSSLNSTALFGDQDAVMKA
IQEARKMREQIQREQLQHHQQGMEAKLSALTGIGLNNCNRADKERAHFESLGHHLSKLGE
DGKIGHRVIDLTRPEDLDGWKALNGSGTGADKPQQYYCWPTGGASTAEARVYREARGRNS
NEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPFYEEQAR
LSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQIPIS
TNAGVVYPGAITMATTTPSPHMTSECSSASASPEPAIPVIQSTYNMKIEPSAMLTNVPII
NGEVDEMDMYEDFDEEPKSDYSSETETLEPIVSAN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctctcctggagccaagatgccgccactcccccagcctcccaacaacagtgga
cccatctccccctccggcctgaagaacgacaagagatcctccagccctgtcactcaagtc
aaggaggagggaacgcagcctctcaacctgtccgcccggcccaagacggcagagctggtc
aagtcccccacgtcccccacacacagcctgttcacaggcagcaagaccagccccaacagc
ctgtccaagagtggcatccccagtcccctcggaggcatgggccgtgggtcttctctggac
atcctgtccagcctgaactccacagcgctgttcggggaccaggatgcggtgatgaaggcc
atccaggaggccaggaagatgagagaacagatccagagagagcagctgcagcaccaccag
cagggcatggaggccaagctctctgccctcacaggcatcggcctcaacaactgcaacagg
gctgacaaggagcgggcacactttgagagccttggtcaccatcttagcaaactgggagag
gatggcaaaattggccacagagtcatcgacctcaccaggccagaggatctggatgggtgg
aaagctctgaatggctctggtaccggagcagataaaccacaacagtattattgttggcct
acaggaggtgccagcacagccgaggcacgggtctacagagaagcccgggggaggaacagc
aacgagccccacatcaagagacccatgaacgccttcatggtgtgggccaaagatgagcgc
cgcaagatcctccaagccttcccagacatgcacaactccaacatcagcaagatcctgggc
tctcgctggaagtctatgaccaaccaggagaagcagccgttctatgaggaacaggcccgt
ctcagtaagatccacctggagaagtaccccaactacaagtacaagccccggcccaagagg
acctgcatcatcgatgggaagaagctccgcatcggcgagtacaagcagatgatgcgctcg
cgacgacaagagatgaggcagttcttcactgtggggcaacaaccgcaaatccccatcagc
accaacgccggcgtggtctaccctggggccataaccatggcaacgaccacaccctcccct
cacatgacgtcggagtgctccagcgcctcagcaagcccggagccggccattcccgtcatc
cagagcacctacaacatgaagatagagcccagtgccatgttaaccaacgtccccatcatc
aacggagaggtagatgagatggacatgtacgaggactttgacgaggagcccaaatcggac
tacagcagtgagactgagacactggagcccatcgtcagcgccaactga
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