Oncorhynchus masou masou (cherry salmon): 135550470
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Entry
135550470 CDS
T10723
Name
(RefSeq) F-box and WD repeat domain-containing 11-B-like
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04114
Oocyte meiosis
omm04120
Ubiquitin mediated proteolysis
omm04218
Cellular senescence
omm04310
Wnt signaling pathway
omm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135550470
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135550470
04340 Hedgehog signaling pathway
135550470
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
135550470
04218 Cellular senescence
135550470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135550470
03036 Chromosome and associated proteins [BR:
omm03036
]
135550470
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135550470
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
135550470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
135550470
NCBI-ProteinID:
XP_064837384
LinkDB
All DBs
Position
12:complement(55895894..55906981)
Genome browser
AA seq
526 aa
AA seq
DB search
MEPEMEDKTLELMNTTFMDSQTDDLSSKKIIVFKTITNGPMTGSRKRPSEGNYEKEKDVC
IQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENIL
SFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRT
TEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISG
LRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL
IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYI
VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL
RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVF
RLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaacgttggagctgatgaacaccactttcatggactcc
cagacagatgacctctcatcaaagaagatcatagtgttcaagacgatcaccaatggtcct
atgacgggctcaaggaagcggccatcggaagggaactatgagaaggagaaggacgtgtgc
atccagctgtttgaccagtggtctgaggctgaccaggtggagtttgtggaacacctgatt
tcacgcatgtgccactaccaacacggccacatcaactcctacctcaaacccatgctccaa
agggacttcatcactgcactgccagctcagggtctggaccacatagcggagaacatcctg
tctttcctggacgcgcgctcgctgtgctcggcagagctggtgtgtaaggagtggcagagg
gtcatctcggagggcatgctgtggaagaaactcatagagcgtatggtccgtacagacccc
ctctggaaaggcctgtcagagaggcaccagtgggaaaagtacctgttcaagaatcgaacc
acagaagtcccaccaaattcctactaccgctccctgtaccccaaaatcatccaggacata
gagacaattgaggccaactggagatgtggtcggcacaatctgcagcggatccagtgtcgc
tcagagaacagtaagggggtttactgtctgcagtatgacgacgacaagatcatcagcggc
ctcagagacaactccatcaagatctgggacaagcagtctctggagtgtctgaagatcttg
acgggtcatacaggttcagtgttgtgtctgcagtatgatgagagggtcatcgtcaccggg
tcctcagactccaccgtcagggtgtgggatgtgaacactggggaggtgctgaacactctg
atccaccacaacgaggcggttctccacttgcgattctgtaacggtctgatggtgacgtgc
tcgaaggaccgttccatcgccgtgtgggacatggcctcgcccacagacatcagtctgcgc
cgcgtgctggtcggccatagagcagcggtcaacgtggtggactttgacgacaagtacatt
gtgtcagcgtccggtgaccgtaccatcaaggtgtggagcaccagtacgtgtgagtttgta
cgtacgctgaatggccataagagaggcattgcctgtctgcagtacagagacagactagtg
gtcagcggctcctcggacaacactatccggttgtgggatattgagtgcggggcatgtttg
cgggtattggaaggccatgaggagttggtccgttgcattcgcttcgacaacaaaaggatc
gttagcggagcctacgatggtaaaatcaaagtatgggacttacaagctgctctggaccct
cgtgcccctgccagcaccctctgtctgcgcacactggtggagcactctgggcgtgtattc
cggctacagtttgatgaattccagatcatcagcagttcccatgacgacactatcctcatc
tgggacttcctgaacgtgtcgaccaatggacagactgagggcaggtcgccctctcgcacg
tatacatacatctccagatag
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