Oncorhynchus masou masou (cherry salmon): 135550473
Help
Entry
135550473 CDS
T10723
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135550473
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135550473
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135550473
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135550473
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135550473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
PepSY
Fibulin_C
PDGLE
Glyco_hydro_26
Motif
Other DBs
NCBI-GeneID:
135550473
NCBI-ProteinID:
XP_064837389
LinkDB
All DBs
Position
12:56115711..56215928
Genome browser
AA seq
1190 aa
AA seq
DB search
MELHLGAVLLWVLVLDCCGCAEAGILYRVQEEQPPSTLIGSLASDQGLPDTGHLYKLEVG
SPYLRVDGKTGDIFTTEIPIDRETLRDCRSIVRGKPCFLEFEVSVTDLIHNQSPRLIEGR
IEVQDINDNTPQFPSPVLTISVPENTHLGALFSIPLATDRDSERNGVADYALTAGPDAVT
LFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVADAND
NAPKFEKATYEAEVSENSPVGHSILQVKANDSDMGPNGEIEYTLHQALDPVPKLLRIDRS
TGIIYVKGPLDREEISDLTFYVVARDKGPQPKSSKTFVTIQVTDQNDNSPAVEIRGIGLV
THSDGVANISEDMPVGTAVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASDSSTNKRKY
FLQTTTPLDYERVREYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPNLFEVAFA
EENQPGDKVVDVVATDADSGTNAELVYSIVADTSTRGLFEIDPDSGEVRARSSLDREHKE
RYEFRVTASDKGSPSHRGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMPPLSAVGMVTV
LDMDQGENARVQLSVEPDGGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRS
SYVGVTINVLDENDNDPVVTKPSNSSFRLLSPLAAPESRVELVEAEDLDTGPNAELVFSI
TGGNPYDLFSISSTTGEITLAKELTRKHGGLHRLVVRVSDAGKPARHATAMVHIYVNETI
ANVSLVEALVGHSLYTPLETDIAGDPDYGLAAQRSNIVYGSLAGVAGVVMVIVVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQGPKNGKGKRGRKGKPSKSPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAT
NTFVGTGGDDNSTGSDQYSDYSYKASQPKYNSKQLPHRRVTFSTANPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGEMEHPENDMRSIPDVAMTGN
CTQECSELGHSDACWMPGQPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHR
AHLPPSRSAYSNSGHAPSQDFPLEEVPLSVATEFPSTSPPSHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcacttgggagcagttctgttgtgggtcctggtgttggactgctgtggttgc
gctgaggctggtatcctctaccgggtccaggaggagcagccccccagcacgctgattggc
agcctggcatcagaccagggcctgcccgacactggtcacttgtacaagctggaggtgggc
tctccgtacctgcgagtggatgggaagacaggggacatcttcaccacagagatccccata
gacagggagacattgagggactgccgcagtattgtcaggggcaagccctgcttcctggag
tttgaagtgtccgtcacagacctaatccacaaccagagccccaggctcattgagggccgc
atcgaggtccaggacatcaacgacaacacgccgcagtttccctcccccgtgctcaccatc
tctgtcccagaaaacacccacttgggagctctgttctccattcccctggccacagacagg
gactcggagaggaacggggtggccgactacgccctcaccgctgggccagacgcggtgacg
ctcttcggcctgcaggtggcggaagacaggggggagaagctgccccagctcatcgtcctg
ggcagtctggaccgggagctcaaggactcgtacgacctgacaatcaaagctgtggacgga
ggtaacccccagcgctatagcagtgccttgctgagagtggtggttgctgatgctaacgac
aatgctccgaagtttgagaaggccacgtacgaggcagaggtttcagaaaacagccctgtg
ggacactctattttgcaggtgaaagccaatgactctgacatgggccccaatggagagata
gaatacacactacaccaggcattagacccagtgccaaaactcctgcgaattgatcgctcc
actggcatcatctatgtcaaagggcccttggatcgggaagaaatcagcgatttgacattc
tacgtagtggccagggacaaaggtccccaacccaaaagctccaagacctttgtgacaatc
caggtgactgaccagaacgacaattcccctgctgtggagatccgtgggatcggcctggtg
acccacagtgacggggtggccaacatatcagaggacatgccagtgggcacggcggtggcc
cttgtccaggtgtctgacagggatgagggggagaatgcagtggtcacctgtgtggtggcg
ggggacgtgccgttccagctgcgcccggctagtgactcgtccactaacaagaggaagtat
tttctgcagactacaacccccttggactatgagagggtcagggaataccgtgtggagatt
gtggctgttgactctggcaacccagctctttctagtactaactcattgaaggtgcaggtg
actgatgttaatgacaactccccagtgttttccccaaacctgtttgaggttgcctttgca
gaggagaaccagccaggggacaaggttgtggacgtggttgccacggacgctgatagcgga
actaacgccgagctggtctacagcatcgtagcagacacatctaccaggggcctgtttgag
attgaccccgattcaggggaggtgagggcacggagctcactggacagagagcataaagaa
cgctatgagttccgggtcactgcgtctgataaaggttctcccagtcacagaggaacagca
actgtcgtggtcaaggtgctggaccgcaatgacaacgaccccaagttcatgctaagtggc
tacagcttctctgttctggagaacatgcccccactcagcgccgttggcatggtgactgtg
ctggacatggaccagggagagaacgccagagtgcagctctctgtggagccagacggaggg
aagtttgtgattcagaatggaacaggaaccatcctgtccagcatctcctttgaccgggag
aaggagagcagctacaccttccgtctgaaggccgtagacgggggagagcctcccaggtcc
tcctatgtaggcgttaccatcaatgtcctggatgaaaacgacaatgatcctgtggtcacc
aagccctccaactcctccttcagactcctgtcccctctagctgccccagaaagccgtgtg
gagctagtggaggctgaagacctggacactgggcccaatgcagagctggtcttcagcatt
actggaggaaacccttatgacctcttcagcatctcctccactactggggagatcaccctg
gccaaggagctgacccggaaacatggtgggctccatcgcctggtggtgagggtgagtgat
gctggtaaacccgcacgccacgccactgccatggtgcacatctacgtcaatgagaccatt
gctaacgtcagtctggtggaagcactggtcggacacagtctctacacccctctggagaca
gacattgctggtgaccctgactacggtctggcagcccagcgcagtaacattgtgtacgga
agcctggcgggagtggcgggcgttgtcatggtgatcgtagtggtggtgtttatccgccac
cgcattcagcgggagacaaagagcggctaccaggctggcaagaaggagaccaaggacctt
tacgcccctaagcaggggccaaagaatggcaaaggcaagaggggaaggaaaggaaagccc
tccaagtcccccaagcccttgggagaggaggaggaggtcagtctccagaagagtctcaag
ttcaacctggatggggtcaacgacagccccaggatccacctgcccctgacatacccccca
ggcagccctgaccttggcagacactaccgctccaactctcccctaccatccatccagctg
caggcccagtctccgtcggcctcccagaagcaccaggcagtccaggacctccctgcaacc
aacaccttcgtagggactggaggagatgacaattcaacaggctcagaccagtactcggat
tatagctacaaggccagccagccaaagtacaacagcaagcagctcccccatcgcagagtg
acattctccacagccaatccagtgcaggatctgcaggatgcatctcagcacagttactat
gacagtggcctggaggaatccgaaacgcccagcagtaagtcatcatcaggcccccgcatc
gggccactgaccctgcctgaggaccactacgagaggaccaccccggatggcagcatcggg
gaaatggagcaccctgaaaacgatatgcgatccattcctgatgtggcaatgacggggaac
tgtactcaagagtgcagcgagctgggccactctgacgcctgctggatgcctgggcagccc
tccccagtgcgcaagaccagaaacccccctaaactctccaccttcgtgccttaccaggag
agaggcagcctgggccgcttggccaacgggagcgccaggctgggtggagaggagcaccga
gcccaccttccaccttcccggagtgcctattccaacagcggccacgccccaagtcaggac
tttcccctggaggaggtgcccctgagcgtggccaccgagttcccatccacctcccctcct
agccacacccccaaacgagagatctacctgtga
DBGET
integrated database retrieval system
