Oncorhynchus masou masou (cherry salmon): 135550502
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Entry
135550502 CDS
T10723
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135550502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550502
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135550502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135550502
NCBI-ProteinID:
XP_064837455
LinkDB
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Position
12:58336992..58689739
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AA seq
426 aa
AA seq
DB search
MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVLEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEGEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQQSPAHYSVPHGYPN
IVATYGRGYTGFAPSYSYQFPGFPATAYGPVAAAVAAARGSGRGARGRGGYMAYPQNAGP
GFPDYGFYSAPSDQRGAPCSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKSP
GGNPPRPGGFPGANSPGPVAELYGPGGQDSNVGNYISAASPQPGSGFGHSMAQSLSGGPG
KTGRSF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatctggaagcccaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgt
tccagaggatttgggttcgttacgtttgcagatgctgccagtgtagataaagtcttagct
caaccacaccacgaattagactcaaagacgattgatcctaaggttgccttcccccgacgc
gctcaacctaagatggtcacaagaacaaagaaaatatttgtgggcggattgtcagccaac
acggtattggaagatgtgaagcagtattttgaacagtttgggaaggtagaagacgccatg
ctcatgtttgataaaactactaacagacatagaggattcggctttgtaactttcgagggt
gaagacgtcgtagagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaagtgatgttcccaccaggcacgcgagggagggcc
aggggcctgccctacaccatggatgccttcatgctggggatgggaatgctgagtgagtat
ggaccaacactactccagcaaagtccagcacactactcagtcccacacggttacccgaac
attgtggcgacgtacggccgtggatacactggattcgccccgagctacagctatcagttc
cctggcttcccggcgacggcgtacggaccggtggcggcggcggtggcggcggcgcgtggc
tcaggtaggggggcccgtggaagaggcggctacatggcgtacccacagaacgcagggcca
ggctttcccgattatgggttttactctgcgcccagtgaccagaggggggcgccctgctcc
tttgcggactatggctccctggggccccaggcggctcagatgctgcacagtgagcatgcc
acctccgcctgcaactcccccctccagcacctgcacagcccggatcagtttaagagccca
gggggaaacccacctcggcctggaggtttccctggtgccaacagccctgggcctgtagcc
gaactgtacggccctggaggccaggactctaatgtgggcaactacatcagtgctgctagc
ccccagcctggctccggctttggccacagcatggcacagagtctatctggtggtccaggg
aagacaggccgaagcttctaa
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