Oncorhynchus masou masou (cherry salmon): 135550546
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Entry
135550546 CDS
T10723
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135550546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135550546
03036 Chromosome and associated proteins [BR:
omm03036
]
135550546
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135550546
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135550546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
C5HCH
Motif
Other DBs
NCBI-GeneID:
135550546
NCBI-ProteinID:
XP_064837539
LinkDB
All DBs
Position
12:60776033..60821031
Genome browser
AA seq
1967 aa
AA seq
DB search
MSAEMLSIPLGTSKLNVLVTKLHGFLAHAPEEDDNTLVTESPEGIMTKDCVEPHSTDRTS
LETSTDALKQSRCGSRRKPSVVIKHSGLDESGASNESDDDCLIVNSNGYPDVTRLPKVTA
LVRPEPVENVRDDFRGTEFHCGKSGHLRRVFPRRRGGGEHLEIVSCTACGQQVNHFQRDS
FNQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFCKKCIL
RNLGRKELSGILDEESKWYCYVCSPAPLLDLVVACDNVLDNLGSLWQDHRKRGSGDGKSG
HCDSHPRHSQNIPTGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNTTFVKF
IQGGMDFKRQYLKTFQSVLKGLKTSHTALEEALWEEFKEIGLPKDGGNFIFGTDAPQQAQ
EGCVEMDIVDKNCLHYLKKIASEHLEENDSDSKGFTDDERPLSSSEMKGVLGTEIIPRRG
RGRPRKNSKPGEDPSNMTKQLVVQLTPVPVEKQPPSGPPELEVEEKKELEEEIKEKVDER
KGNCESIEPATEGEYESAEEGNESLVLELEDEPENRRSPRVKTTPLRRPGEGKTKSTPSG
ADSEGDSDPDTSPNVEVPQGADEGGLGRGIEDSDSDEVPAVLQRAAMAPSSDEAGSDDGD
HRSVTKKCLFGLKKNTALSPERVVRKRKVQDRSSDSDSSSDNPDLQKEIKTMSRPRGRPR
KVKREDEPTPSKNSPQHRPPGRPRKVKKENESAFSKEGNTQVTKPKSTPRSQQKTKQSPS
SSSQEEGDQDSESSDDSGDQKIKPITEEVALLGSAAFHQSSGDEEQTRSGPSWEAEDDDD
PENRIAKKMLLAQIKANYSSGEDFSSDEESSQDDESDREEKAQEKGKDQTSDENGETSSL
TSDSESSKTRHRHCLLRHKLSLGDGNPSDQKTAEENGNEQKVKKSRRTEGETLESQSSDD
SQSEQEESGMSEELSQSENEGNEQKPKSSSTSRVERESVRSYLQKKQQPSYIVLSDSSVD
KSDDDEKDGDNKGTPKGRKKIRRIIIDEHLRSETQRALKEEEDRCRRLAGREQREDFREV
IVIDDEVSQVACPITTKLVLDQDEGTREPLIQVHRNLVTRLKPHQVDGVQFIWDCCCESV
KKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSRCLNFRTALVVCPLNTILNWVNEFD
KWQVNMGADKVKVTELATLKRPQERYIALQKWQKEGGVMIMGYEMYRNLTLGLKVTHRQF
KKTFNSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRVVLTGTPLQNNLNEYHC
MVNFIKVNLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKNRAHVLHAMLAGCVQRRDY
SALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGAGSVVEGARGKTGTSLFKDFQILS
RIWTHPWCLQLNYISKENKGHFDGKHQGKAESKEKENKGKLRNADEKSNDVEVIMVWNSS
SKGVNVEGDQRAGPLVPVVDAVRASTSFRPDSLAADWYKSMLSDSDATILGHSGKMVLLF
EILRMAEELDDKLLVFSQSLISLDMIEDFLDLANKAKDNGQSSLYKGDGSWIRNIDYYRI
DGSTSATSRKKWAEEFNDATNERGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQ
SIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIQRHFTLFELTE
LYMFEPDLLDDPNSEKKSKRITPLLPKDIVLAELLQICKEQIVRYHEHESLLDHKEEEEL
SEADRKAAWAEYEAEGAFFLNKAALSSTNVPSPSTSRMANSLSSLYKKTNEQLKNMINAS
RDKVSEAIKSLHSLKNLSMDDYVLRLWHDNPSLDEKQVKVLAQTWKTSNDKERERRQALY
HDLLSKQQSLTMCIQTILTSRKTEVTQAATVTNQTPALTDAVKKPMQ
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagagatgctcagcattcctcttggcacgagcaagctcaatgtgctggtgacc
aaactgcatgggttcttggctcatgctccagaggaagatgacaacacactggtgactgaa
agtcctgagggtataatgaccaaggactgtgtggagccacactcaacagaccgaacctcc
cttgagacctcaacagatgccttgaagcagtccagatgtggttccaggagaaaaccttcc
gttgtgattaaacacagtggactggatgaatctggtgcttcaaatgaaagtgatgatgac
tgcttgatcgtcaattcaaacggttatcctgatgtaacaagattgcctaaagttactgca
ctggtgaggcctgagccagtggaaaatgtcagagatgacttccgaggtacagaattccat
tgtggaaaatctggtcatctgaggagagtttttcccaggagacgtggaggaggtgaacac
ttggagattgttagctgtacagcctgtggccagcaagttaaccacttccagagggactcc
ttcaatcagcatccggtactcaaagtacttatttgcaagtcttgtttcaagtattactca
agtgatgacatcagcaaggattgtgatggcatggatgaacagtgcagatggtgtgcagag
gggggaaacctgatctgctgcgacttttgccccaacgccttctgtaagaaatgcattttg
cgtaatctggggcgaaaggagctgtctggcatcctagatgaggagagtaagtggtactgc
tacgtatgcagcccagcgcctcttctagacctggtcgtcgcctgtgacaacgttcttgac
aacctggggagtttgtggcaagaccaccgcaagaggggcagcggtgatggcaaatctgga
cattgtgactcccatcccaggcattctcaaaacattcccacgggtcattggaaccatagt
ggcatggatggtcatgtggtgttcaactacaacacccttcaaattccagaggagatggcc
aaaaaggcaaaaaaccttgtggactctacaaacactgtaaacacaactttcgtgaaattc
attcaaggtggaatggattttaagcgacaatacttgaagactttccagtcagtactaaag
ggtctaaagacgtcccacacagctctggaggaagccctttgggaggagttcaaagagatt
ggtctgccaaaagatgggggaaacttcatttttggtactgatgcacctcaacaagcacaa
gagggttgtgtggaaatggacattgttgataaaaattgcctgcattacttaaagaaaatt
gcatctgaacatttggaagagaatgattcagactctaaaggctttacggatgatgaaagg
cctttgtcctcaagtgaaatgaaaggtgtccttggcacagagataataccccgtcgaggt
agaggcaggccacggaaaaactccaaacccggagaagatccttccaacatgacaaaacaa
ctggtggtgcaacttacacctgtccctgttgaaaaacagccaccctctggccccccagag
ttggaggtggaggaaaaaaaggagttggaggaagaaataaaagaaaaagtggatgaacgt
aaggggaactgtgaatctattgaacctgcaacagaaggggagtatgaatctgctgaggag
ggaaacgaatctctggtgctggaactggaagatgaaccagagaatagacgctcacctcgg
gtaaagaccacgcccttacgcaggccaggtgagggcaagaccaagtctaccccctcaggc
gctgacagtgagggtgactccgaccctgataccagccccaatgttgaagtgcctcaagga
gctgatgagggagggcttgggagaggaattgaagactcggactccgatgaggtccctgct
gtccttcagcgggcagccatggctcccagttcagacgaagccgggagtgacgatggagac
catcggagcgtgaccaagaaatgcctcttcggcctgaagaagaacactgccctctctcca
gaaagagtggtccgcaaacgcaaggtgcaagaccgctcctctgactccgactcctccagt
gacaatccagacctgcagaaggagatcaagactatgagcagacccagggggaggcctcgg
aaggttaagagagaggatgaacctacccccagcaagaatagtccacaacataggcccccg
ggcagacctcggaaggtcaagaaagaaaatgaatctgcattcagcaaggagggtaatacc
caggtaaccaagcctaaaagcacacctcggtcccagcagaaaacaaagcagtcgccatcc
tcttccagtcaagaagagggagaccaggattctgagtctagtgacgacagtggtgaccag
aagattaagcctatcactgaggaggtggccttactggggtcagcagctttccaccagtca
tctggcgatgaagagcagacccggtctgggccttcttgggaagcagaagatgatgacgat
ccagaaaatagaatcgctaagaaaatgctcttggcccaaatcaaagccaactactcatcg
ggggaggatttctcttcagacgaggagtcatcgcaggatgatgaatctgacagggaagag
aaggcgcaggaaaaggggaaagatcaaacgtcagatgagaatggggagacctccagtttg
acctctgactctgagtccagtaaaactcgtcacagacactgtctgctacgccacaagctc
agccttggcgatggaaatccaagtgatcagaaaacagctgaagaaaatgggaacgagcag
aaagtcaagaagtctagaagaaccgaaggtgagacattggagagccagagtagtgatgat
agccaatcagagcaggaagagtctggtatgagtgaagagctgagccaatctgagaacgag
ggcaatgaacagaagcccaaaagctcatctacctctagagtcgagagggaatcagtccgt
agttatctacagaagaagcagcaaccctcatatattgtgctgtctgactccagcgtcgat
aagagtgacgatgacgagaaggacggagacaacaaaggtacacctaagggccgcaagaag
atccgcagaatcatcatagatgagcacctccgctcagagacccagagagccctgaaggag
gaggaggatagatgcagacgcctggcaggcagagagcagagggaggacttcagagaggtg
attgttattgacgatgaggtgtctcaagtggcctgtccaatcaccactaagctggtcttg
gatcaggatgaggggaccagggagccactcattcaggtgcacaggaacctggtgaccagg
ctcaagcctcaccaggtggatggtgtgcagtttatctgggactgttgttgtgagtcagtg
aagaaggccaattcaacccctggatcaggttgcttactggcccactgcatgggcctaggg
aagacactgcaggtggtgacattcctccacacaatgctgcagtcaaggtgcctgaacttc
aggactgccttggtggtgtgtccactcaacactatccttaactgggtcaacgagtttgac
aagtggcaagttaacatgggagctgacaaagtcaaggtgacagagttggcaacactgaag
cgacctcaggagcgttatattgccctgcagaaatggcagaaggagggtggtgttatgatc
atgggctatgagatgtaccgcaacctcacactaggcctcaaagtcacccacagacaattc
aaaaagacctttaacagcacactggtcgatccaggtccagactttgtgatctgcgatgag
gggcacatccttaagaacgaggcgtccaacatctccaaagctatgagtgccattaagacc
aaacggagagtggtgctgacaggcaccccactgcagaacaacctcaatgagtaccactgc
atggtgaacttcatcaaggtgaaccttctaggctcaatcaaggagttccggaatcggttt
atcaaccccattcagaatggccagtgtgcagactccacccccagagatgtccgcatcatg
aagaatcgcgcccatgtccttcatgcaatgttggcaggatgtgtacagaggagagactac
tcagccttgaccaagttcctgccccctaaacatgagtatgttatggcagtgagggtgacc
cccctccagtacagactgtatcgctactacctggacaacttcactggagcaggatccgta
gttgagggagccaggggcaagactggaaccagcctctttaaggacttccagatactcagc
cgaatctggacgcatccctggtgtctgcagctcaactatatcagtaaagaaaataagggc
cattttgatggaaagcaccaggggaaagctgagagtaaagagaaggagaacaagggaaaa
ttgcgtaatgctgatgaaaaaagcaatgatgtggaagtgatcatggtgtggaacagttca
tcaaagggtgtcaatgtggaaggagaccagcgagcagggccactggttccagtggtagat
gcggtgagagcgtccaccagtttcaggcctgacagtctggctgcagactggtacaagtca
atgctgagtgattctgatgccaccatcctgggacactcagggaagatggtgctgctgttt
gagattctccgaatggcagaggaactggacgacaaactgttggtgtttagtcaatccttg
atctcattagacatgatcgaagatttcttggacctcgctaacaaagccaaagacaacgga
caatcatccttatacaaaggtgatggcagctggatcagaaacattgactattaccgtatt
gatgggtccaccagtgccacatccaggaagaaatgggctgaagagttcaatgatgccacc
aatgagcgaggtcgtctgtttctcatctcaacaagagctgggtcccttgggatcaacctg
gtagcagctaacagggtcataatttttgacgcttcgtggaacccctcctatgacatccag
agcatcttcagggtgtaccgttttggccagctgaaggcagtgtttgtctaccgcttcttg
gcacagggcaccatggaggagaagatctatgaccggcaggtggccaagcaatctctatcg
ttccgggtggtggaccagcagcagatacagagacacttcactctgtttgaactgacagag
ctttacatgtttgagccagacctgctggatgaccccaactcggagaagaagagcaagcgg
atcacacccctgctgcccaaggacattgtcctggcagagctgctgcagatctgtaaggag
cagattgtccgataccatgaacacgagtccctgctggaccacaaagaggaggaggagctc
agtgaggccgaccgcaaagctgcctgggctgagtacgaggcagagggtgcattcttcttg
aataaggcagcactcagcagcaccaacgttcccagcccttccacctctcgtatggccaac
agtctgtcatccctatacaagaagactaatgagcagctgaagaacatgattaatgccagc
cgtgacaaggtcagcgaggccatcaagtccctgcattccttaaaaaacctctccatggat
gactatgtgttgcgcttgtggcatgataacccaagtctagatgagaagcaggtgaaagtt
ctggcccagacctggaaaaccagcaatgacaaggagcgggagcgaagacaagccttatat
catgaccttctctcaaaacaacaatcacttacaatgtgcatccagaccattttgaccagt
agaaaaactgaagtgacacaggctgccacggtcaccaatcagacaccagccttgacagac
gccgttaagaaacccatgcagtga
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