Oncorhynchus masou masou (cherry salmon): 135550555
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Entry
135550555 CDS
T10723
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
omm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135550555
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135550555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135550555
04090 CD molecules [BR:
omm04090
]
135550555
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Nectin family
135550555
CD molecules [BR:
omm04090
]
Proteins
135550555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
DUF6022
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
135550555
NCBI-ProteinID:
XP_064837552
LinkDB
All DBs
Position
12:complement(60989398..61055970)
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AA seq
569 aa
AA seq
DB search
MEDGSTFKMFLPCLRNNPLYKGQRAVFIVLLYILTGVGCSQVLVPRKVSAVLGKNVTLGC
SVEVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPNYVRRLSFRSPSSHDATIVLE
DVGFEDIGVYTCKVATFPLGNTQASTTVSVLVEPRVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVSLQDEANGTTSTQVRYLWQPTRHIQGHTLTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGRENIQLTCKANANPPAHHFTWIRLDGKMPEGV
EIVNNTLLFLRPLQWNDSGVYRCEVANDINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGS
ASSSTSVGDKRRVFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVVGGVCYLRQRQTF
RGDYYTKQYLGPSDMQKAPPQHELHPTKPENNVYLDKDREEWGDRERNHVRDRERLHLHP
TSTTIINNQREPEYQPNGLTRAMRNGDHHDHLRSYPSPHQTGHARYAAPSHPLSTGSPYL
SDDCYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctaaggaataacccgctttac
aaaggacagcgtgctgtatttattgttcttctgtacatcttgacaggtgtggggtgcagt
caggtgttggttccccggaaggtgagtgctgtattggggaagaatgtgacgttgggctgt
agcgtggaggtgggggccaacctcagtcttacccagagttcctgggagcgccggctcccc
acaggctcggtgactgtggcggtgtacaatcccgtgttcggcatctcgatccccccaaac
tatgtgcgccgcctgtccttccgctcaccctcctcccatgacgccaccatcgtactggag
gatgtgggctttgaggacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccagggtgtatgtgtcggct
ggctcggtagctctgatcgacgagggcaatgaaacagtggtggccacctgcatcgctgag
cgggcccggcctcccgccgaagtctcctgggagactgacctgtttggccaatcagaggtg
tcgctgcaggacgaggcaaacggcacgaccagcacccaggtgcgctacctgtggcagccc
acccgccacatccagggtcacaccctcacctgtgtggtgcgtcatcctgccctgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacattgtggtcgtaggt
tatgatggtgactggtatgtgggccgtgagaacatccaactgacctgcaaagccaacgca
aacccaccagcacaccacttcacatggatcagactggacgggaaaatgccagaaggggtg
gagatagtgaacaacacattgctgtttctgaggcccctccaatggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgaggatacgcata
caagatcctcccaccacctccatgccctccaccacccctgcgcctgtcctaaccggctct
gcctcctcatccacctctgtgggagacaagcgacgggtcttcacctcccccaccctggca
gccctgccccccgacaaccacctgggcaccattgtgggcggggctgtgggcggagccttg
ttcctccttctgctgctggtagtgggcggggtctgttacctacgacaacgacagaccttc
cgcggggactactacactaagcagtacctagggccttcagacatgcagaaggctcctcca
cagcacgagctccaccctactaagcctgaaaataacgtctacctagacaaggaccgcgaa
gagtggggcgaccgcgaacgcaaccacgtgcgggaccgtgaacgcctccacctgcatcca
acatcaacaaccatcataaacaaccaaagagaaccggagtaccagcccaacggcctcacg
agggcgatgaggaacggagaccaccatgaccacctgcgtagctaccccagcccacaccag
accggccatgctagatacgctgccccgtcacacccactgagcactggctccccctacctg
tcggatgactgctatgacagcggggctgagggggactatgtctcccatatggacggctca
gtgatctcacgcagggagtggtatgtctga
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