Oncorhynchus masou masou (cherry salmon): 135550607
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Entry
135550607 CDS
T10723
Symbol
xndc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
KO
K10803
DNA-repair protein XRCC1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03410
Base excision repair
Brite
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
135550607 (xndc1)
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NCBI-GeneID:
135550607
NCBI-ProteinID:
XP_064837648
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Position
12:complement(62500983..62505915)
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AA seq
452 aa
AA seq
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MAPVKIKHVVSFTSQDPKNCVENLCVVGGDSRSWLCNPQDRSGVLRAELQLERASYFGYI
DVGNCGSAFIQIDVGRSSWPLDQPYITLLPTATLMSPAESRQGTGLTGVRMFKKGDFLSE
GAEDSWDRVRVTCTQPFNKRSQFGLSFLRIRSPLEESEEGTTQTCKENQGQTTPDKSASG
VREWLSSPAVQKTFFGGAKGEGVVLSRTARMVLTASQAARRSLSLPSTSLSPSHTSSSGT
QNTATSSPPTAKPDATTHIPNQGKPGAHTATHNKGKPVGNMGNIHPHTASMACLSTVRSS
KENTSQRQLKRKPNSKSRQNQLNGTTSSKHGKPTVCKRSIATLQHTATAPHPHPSPEPQD
TGDLETTCPICGVFFTAEYLPLHAASCQQVETRKLPGGIVTPVPRHFPVSPASLEESMVP
CPLCSFKFPLSHIQMHASTCGDPVDPHVIWVD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccccagtgaaaattaaacacgtcgtttcattcacgtcacaggaccccaagaactgt
gtggagaacctatgtgttgtgggtggagacagcaggtcgtggctgtgcaacccccaagac
cgaagtggagtcctcagagcagaactgcagctggagcgagcctcatactttggatacatc
gatgtggggaactgtggatctgcgttcattcagattgatgttggccggtcctcttggccc
ctggaccagccctatatcaccctgttgccaacagcaacactgatgagtccagcagaatcg
cgacagggcactgggctgaccggagtgagaatgttcaagaaaggtgatttcctgtcagaa
ggtgcagaggacagctgggaccgggtgagagtaacctgcacccagccttttaacaagcgc
tctcaatttggcctgtccttcctgcgcatccgcagccccctggaggagagcgaggagggc
accacacagacttgcaaagagaaccagggtcagacaaccccagacaaatcagcatcaggc
gtgagagaatggctgtcgagccctgctgtgcagaaaactttctttgggggagcgaaaggg
gagggtgtggttctgagccggacagctcgtatggtcctcacagcgtcccaggctgccagg
cgttccctttcccttccttccacttccttgtctcccagtcacacatcatcctctggcact
cagaatacagcaacctcttcccctcccacagccaagccagatgcaactactcatatcccc
aaccagggaaagccaggggctcatacagctacacacaacaaaggaaagccagttggaaat
atgggaaatatacaccctcacacagcttcaatggcttgtttaagcacagttcgcagctcc
aaggaaaatacttctcaaagacagctgaagagaaaaccgaactccaaaagcaggcagaac
cagctgaatggcaccacctctagtaagcacggaaaacctacagtctgtaagaggtcaata
gctactctacaacacactgccacagctcctcatcctcacccatctccagagcctcaggac
actggtgaccttgagaccacatgcccaatatgcggagtgttctttactgcagagtacctg
ccactccacgccgcctcctgccagcaggtggagaccaggaagctccctggggggattgtg
acccctgttccacgccacttccctgtctctcccgctagcctggaggagtccatggtgccc
tgccctctctgctccttcaagttccctctgtcccacatccagatgcacgccagcacctgt
ggagaccctgtggacccccatgttatctgggtggactag
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