Oncorhynchus masou masou (cherry salmon): 135550706
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Entry
135550706 CDS
T10723
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135550706 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135550706 (trpv1)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135550706 (trpv1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
135550706
NCBI-ProteinID:
XP_064837826
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Position
12:68044396..68064218
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AA seq
804 aa
AA seq
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MSKSKGPEYPSFSLETDDRTDDERAQSRQVKKPDRLVSALGLGSSEGPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLQENKEDRDSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRNGRNNTIEYLLDISEKMGDIKELVNAAYTDSYYKGQ
TALHIAIERRSTYFVELLIKKGANVHAKACGKFFQLNDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYHRVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTAARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRNLSRKFTEWVYGPVHSSLYD
LDSLDSYEKNSVLEIIVYSSDIPNRHEMLQIEPLNRLLEEKWDKFAARMFFLNFLVYLVY
LSVFTAVAYYRKKGTPPFTLEHTRQEYLRLAGQVFITVGACYFFIRGILDLKRKRPSLDT
LLIDGYSEILFFLQAIFFLASSVLYCCGREEYLGFFVLCLALSWVNLLYFSRGYRHMGIY
SVMIQKMILCDILRFLFVYVTFLFGFSAAVVTLLMEPELPANNTAHPINSTDGRGRTFFL
PTEDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLLN
MLIALMSRTVEKMSLESTSIWKLQRAITILDLERSLPRCLRRRLRSGVDKDLGTRAGEKD
RRWCFRVEEVNWNKWNTNLGIINEDPGSGETARLSPTHSSRTLGRERSWRGFLGNVSRRQ
HTQPQQQTQVESTEMSSLSPLNHV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcaaagggcccagagtacccttccttctctctggagacggatgacaggaca
gatgatgagagggcacagagcagacaggtgaagaagcctgaccggctggtgtctgcccta
ggcttaggcagttcggaggggcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaagaagtacgatgtttg
caggagaacaaagaggacagggacagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgatgtcatgaagctggaggggctgcatcagtacttgcatcagtccatg
aaaaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaatggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggggacatcaaagaattagtaaatgctgcatacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcacctattttgttgagctattgatcaag
aaaggagcaaacgtccatgccaaagcctgtgggaaattcttccagctcaatgatggaccc
agcttctactttggtgagctacctctgtccctggctgcatgcaccaaccagcctgaggtg
gtggactttctgctggagaatgactaccacagagtggatgtgagggagagtgattctctg
ggtaacatggtgttgcatgccctggtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtatgaccacatcctcacaacagctgcccgcctgcaccccaaatgg
aggctggaggacattgagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
aacctgtcccgtaaattcactgagtgggtttacggacccgtccactcctccctgtatgac
ctggactcactggactcctacgagaagaactctgtcctggaaatcatcgtttacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggacaagtttgctgctcggatgtttttcttaaacttcctggtttacctggtttac
ctctccgtcttcactgctgtcgcctactacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcaggtttttataactgtgggagcc
tgctatttcttcataagagggatattagacttgaagagaaaacgtccaagcctggacact
ttgctgattgacggatacagtgaaatccttttttttctgcaggcgattttcttcctggcc
tcctcagtgctgtactgctgtggtagggaggagtacctgggtttttttgtgctgtgtctg
gctctcagctgggtcaacctgctctacttctccaggggatacagacacatgggcatctac
agtgtcatgatacagaagatgatcctatgtgatatcttgcgctttctctttgtctacgtt
accttcctctttgggttttcagcagcggtggtcactttgttgatggaacctgaattgcca
gccaataatacagcacatccaataaacagtacagatggaagaggtcgtacctttttcctt
cccactgaggattcgtgtataaaacccactttcaggaacatctctcacactatcatggag
ctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtacaag
gaagtgttctacatgctgctaatctcctacatcgtgctcacctacatcctgctgctcaac
atgctcatcgccctcatgagccgcactgtggagaagatgtccctggagagcaccagcatc
tggaaactacagcgggccatcaccatcctggatctggaaaggagcctgcctcgctgcttg
agaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaagac
cgccgatggtgcttcagagtggaggaagtcaactggaacaaatggaacaccaacctggga
ataatcaatgaggatccagggagcggagaaacggccaggctgtcccctacacacagcagc
agaacactaggcagagagaggagctggcgggggttcctgggaaatgtcagtcgaagacaa
catacacagcctcagcaacaaacacaagtagagagcacagagatgtcctctctgtctcct
ctcaaccatgtctga
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