Oncorhynchus masou masou (cherry salmon): 135550719
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Entry
135550719 CDS
T10723
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135550719 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550719 (cnot8)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135550719 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135550719 (cnot8)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
EKR
Motif
Other DBs
NCBI-GeneID:
135550719
NCBI-ProteinID:
XP_064837842
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All DBs
Position
12:68539581..68543984
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AA seq
285 aa
AA seq
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MPAALADTSQIICEVWASNVDEEMRKIRQIIQSYNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLSFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQNQNGISSSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgcactggcagataccagtcagattatctgtgaggtctgggcaagcaatgtg
gatgaggaaatgaggaaaatccgacagataattcaaagctacaacttcattgccatggac
acagaattccccggagtggtggttcgacccattggcgagtttcgcagtacggtagactac
cagtaccagctcttgaggtgcaacgtggaccttctgaaaatcatccaactgggactgtca
tttatgaacgaggatggagactatccccctggaacgacgacatggcagttcaatttcaaa
tttaatttaacagaggatatgtactcccaggactcgatagacttacttcagaactccggc
ctccaattcaaaaagcacgaggaagaggggattgacacactctactttgctgagctcctg
atgacatccggtttagtgctgtgtgaaaatgtcaagtggctctcctttcacagcgggtac
gattttggctacctggtgaagctattaacagacactcggctacctgaggaggaacatgag
ttcttccagatcctcaatctcttcttccctgcaatctatgatgtcaaatatctgatgaag
agctgcaaaaacttgaagggaggactccaagaggtggctgaccagctggaactaaagagg
atcgggagacaacaccaggccggttcggattcgctgctcacagggatggccttctttagg
atgaaagagcttttctttgaagacaacattgatgacgcaaagtattgtgggcgattgtat
ggattgggctctgggtccactcaaaatcagaacggcatctcaagctcttcccaagaggaa
accaacaacaagcactga
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