Oncorhynchus masou masou (cherry salmon): 135550766
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Entry
135550766 CDS
T10723
Name
(RefSeq) rab GTPase-binding effector protein 1-like
KO
K12480
Rab GTPase-binding effector protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135550766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135550766
Membrane trafficking [BR:
omm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135550766
Protein recycling
Rab4 associated proteins
135550766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
Fez1
KIF21A_4th
Fib_succ_major
4HB_RdRP3_N
Motif
Other DBs
NCBI-GeneID:
135550766
NCBI-ProteinID:
XP_064837942
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Position
12:71134455..71160562
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AA seq
855 aa
AA seq
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MADQASGSARQPQHDAVLQQRVAALEQERAEFVKRKQQLESEFNQKRAKFKELYLSKEEE
LKCQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAIDQVKGQWQEEVAS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREVVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEQEIAALKVKLTVAGDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKRDQEEDEKERISQAKEQNEEDGTETEPLEDSFLGLSI
EEPHSAHGSMHSLDSDLVAGGPMDLYKDGLRRVQSTDSLGSSPGLQGLGGYNHKAKSASH
LDESDFGPLVGADCGAPEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETA
SLMSSISHAHDTTFLTPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQ
GQEAETRDQVKKLQVMLRQANDQLERTMSEKQELEDSVKQGNEETTAKVAALMHRVQESE
SLLKTLQEAFSQAKRNTQEQMAVLMQSREQVAEELSRLQRDNDSLTGKHRLHLSLQQQED
FKLPTMVQELQALVLQLREDIVVVRTAADHLEEKLKAEILFLKEQLQAEQCLKENLEDTL
QLEIDGCKEEIASLSSLKTELERVKAEKEQLESSLAEKRKTLASVQGLKSSLEEQLRELT
TTKTALEAQALDEKDKALRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLDRIRAI
LNNTNLTDISQLPET
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggcctcgggatccgcccggcagccccagcatgacgcggtgctccagcag
cgagtggcagccctggagcaggagagagctgagtttgtcaagcgcaaacagcaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacctgtccaaagaagaggaa
ctgaagtgccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtacaggcc
cagctggaacaggcccaagctgacatggagaacatcaaggcggtggccactgtgtcagag
agcaccaagcaggaggccattgaccaagtcaagggacagtggcaggaggaggtggcctcc
ctacaggccatcatgaaagacacagtgcgtgagtatgaggtgcagttccaccagcgcctt
gagcaggagcgtgcccaatggaaccagtacagggaggtggtggagagggagatgggtgag
ctgagacaccgcctctctgagggcggccaggaggaggagaacctggagaacgacatgaag
aaggcccaggaagatgcagagaagctacggtcagtggtaatgcctatggagcaggagata
gcagctctgaaagtcaaacttactgtggcaggggacagggtgaaggagctggaggcctcg
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtcagtccttcaggaggacgcagagaaacta
cgaaaagagctccacgaagtgtgtcacctcttggagctggagcggcagcagcacaaccag
ctgaagcacacttggcagcgggccaacgaccagttcctggagtcacagaggctgctgatg
agggacatgcagaggatcgagaacgtgctctcttctgagcagctccggcaggtggaagaa
attaagaagagggaccaggaggaggatgagaaggaaaggatcagccaggccaaggagcag
aacgaggaagacgggacagaaaccgaacctttagaagactcattccttgggctcagtatt
gaagagccccacagtgcccacggctccatgcactccttagactctgacctggtggcaggg
ggccctatggacctctacaaagacggccttcggagggtccagtccacagacagcctgggt
tcctctcctggtctccagggcctggggggctacaaccataaggccaagtcagccagccac
ctagatgagtccgacttcggacccctggtgggggcggactgcggggcccctgagggcctg
gcgggctttggggacacactatcggtcagctccatccagctgacggccggccacttcctg
ctcaccaaggaccaggagaaggctataaaggccatgacgccggagcaggaggagactgcc
tcgctgatgtccagcatctcccacgcccacgacaccaccttcctgaccccgtcaggctac
cgcctggtcagtgaccaggagtggaacctgcttcagcaagaggtgaagaacgcaggaagg
aagttgggacggcggtgtgacatgtgctctaactacgaaaaacagctgcaggtcatccag
ggccaggaggcagagacacgcgatcaggtaaagaagctccaggtgatgctgcggcaggcc
aacgaccagctagagagaaccatgagtgaaaaacaggagttggaggactctgtgaaacag
ggcaacgaggaaaccactgcaaaggttgctgctctcatgcacagagtccaggagtccgag
tcactgcttaaaacactacaagaggccttcagtcaagccaagaggaacacacaggaacag
atggctgtgctgatgcagtccagggagcaggttgcggaggaactgagcagactgcagagg
gacaacgacagcctaacaggcaaacaccgactccacttatctctccagcagcaggaggac
ttcaaactacccaccatggtgcaagaactacaagccctggtgctgcagttgcgggaggac
atagttgtggtgcgcacggctgcagaccacctggaagagaagctgaaggcggagatcctg
ttcctgaaggagcagctccaggcagagcagtgcctcaaagagaacctggaggacacacta
cagctggagatagatggctgcaaggaggagatagcgtcattatccagtctgaaaactgag
ctggagcgagtgaaagctgagaaagaacagctggagagcagcctggcagaaaagaggaag
acattagcgagtgtccagggtctgaagagcagtctggaggagcagctcagagagctcacc
acaaccaagacggccctggaggctcaggcattggatgagaaggacaaagccctgcggttg
cagacggagctggatgttagtgagcaggtgcagagggactttgtcaagctctcccagaca
ctccaggtccagttggagcggatcagacaggctgactctttagaccgtatccgagccatc
ctcaacaacaccaacttgactgacatcagccagctcccagagacatga
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