Oncorhynchus masou masou (cherry salmon): 135550792
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Entry
135550792 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135550792
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135550792
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135550792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
zf-RING_5
FYVE
SDE2_2C
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
135550792
NCBI-ProteinID:
XP_064837978
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Position
12:complement(72196127..72208887)
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AA seq
341 aa
AA seq
DB search
MWTSCCSWFCLEPTATVEENVSSWRQAYTNSGYNQSLTSPEHMCKACGGQFDTIARKHVC
VDCKKNFCGHCSVQLEPPRPRLCHTCQHFHGTLFDRDQLMRLKVRELRDYLHLHEVPTQT
CREKEELVELVLGQQTPSTSTSSETVSSQPTAHNNVPSPGTPSPPQTQGPISPDTLSPEQ
PEQSAPEAEPESEQISDDEEDDEEEEDEGEESSDNEETLIPGRRASLSDLSCVEDIEGLS
VRQLKEILARNFVNYKGCCEKCELMERVTRLYNNQKDLQNLDPAAPKSQEENLCRICMDS
PIDCVLLECGHMVTCSKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatcctgttgtagctggttttgtttagaacccaccgccacagtggaagaaaac
gtcagctcctggcgccaggcctacacaaactcgggctacaaccaatccctgacctctccc
gaacatatgtgcaaggcctgcggaggccaattcgacaccatcgctaggaagcatgtctgc
gtggactgcaagaagaacttctgcggccactgctctgtgcagctggagccgccacgcccg
cgcctctgccacacatgtcagcactttcacggaaccctattcgaccgcgaccagttgatg
cgactcaaggtgcgggagctgcgcgactacctccacctgcatgaggtgcccacccagacg
tgccgggaaaaggaggagctggttgagctggtcttgggccagcagacccctagcaccagc
accagcagtgagaccgtgtcctcccagcccacggctcacaacaacgtcccttccccaggc
acaccatcccctccccagacacagggccctatcagccccgacacattgagcccagagcag
ccagaacaatcagcccccgaggcagagccagagtcagagcagatatctgatgatgaggag
gatgatgaagaagaggaggacgaaggtgaagagtcatcagacaacgaggagactctgatc
cccggccggagggcctctctgtctgacctgagctgcgttgaggacattgagggcctgagc
gtgcgccagctgaaggagatcttggcccgcaactttgtcaactacaagggctgctgcgag
aagtgtgagctgatggagagggtcacccgcctctacaacaaccagaaggacctccagaac
ctagaccctgcggctcccaagagccaggaggagaacctctgtcggatctgcatggactct
cccattgactgtgttctgctggagtgcggccacatggtcacctgcagcaagtgcggcaaa
cgcatgagcgagtgccccatctgtaggcagtacgtggtacgggcggtgcatgtcttcagg
tcctga
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integrated database retrieval system
