Oncorhynchus masou masou (cherry salmon): 135550794
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Entry
135550794 CDS
T10723
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030
DNA replication
omm03410
Base excision repair
omm03420
Nucleotide excision repair
omm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135550794 (rfc2)
03410 Base excision repair
135550794 (rfc2)
03420 Nucleotide excision repair
135550794 (rfc2)
03430 Mismatch repair
135550794 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135550794 (rfc2)
03036 Chromosome and associated proteins [BR:
omm03036
]
135550794 (rfc2)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135550794 (rfc2)
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135550794 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
135550794 (rfc2)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135550794 (rfc2)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135550794 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
135550794 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
RCF1-5-like_lid
Mg_chelatase
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_19
MipZ
nSTAND3
AAA_18
AAA_24
AAA_assoc_2
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
SLFN-g3_helicase
DNAX_ATPase_lid
MeaB
NTPase_1
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
135550794
NCBI-ProteinID:
XP_064837980
LinkDB
All DBs
Position
12:72208935..72216205
Genome browser
AA seq
353 aa
AA seq
DB search
MDVAMNEVDSEQIQTDVQLKKDEAHAKLSSSRYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLRDEQIMMRLLEVVEKENLVTSNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWALGYSPEDIIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDTS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgatgaatgaggtcgattctgagcaaattcaaacagatgttcaactgaag
aaagatgaggcccatgcgaagttgtctagtagtagatatgagctgccatgggttgaaaaa
tacagacccttgaagttgaatgaaatagtaggcaacgaggagactgttagcagattggag
gtgtttgccagagagggaaatgtgccgaatatcattattgcaggtccccccggtacagga
aagaccaccagtattctgtgtttggcgcgagctcttctgggcccagccatgaaagatgct
gtcctggaactgaacgcctctaatgacagaggcatcgatgtagttcgaaacaagatcaag
atgtttgcccagcagaaagtcaccctccctaaagggagacacaagatcatcatcctggat
gaggctgacagtatgacagacggagcccagcaggccttgaggaggaccatggagatatac
tctaaaaccacacgcttcgctctggcatgcaacgcctccgacaagatcattgagcccatt
cagtcacgttgtgcagtcctgcgctacaccaagctgagggacgagcagatcatgatgcgt
ctgctggaggtggtggagaaggagaacctggtcaccagcaacgacggcctggaggccatc
atcttcaccgcccagggagacatgagacaggcgctgaataacctacagtccacaaactct
gggtttggctacattaacagtgagaatgtgttcaaggtgtgtgatgagccacatcccctg
ttggtgaaaagcatgctcgaacactgtgtcaatgcaaacattgatgaagcttacaagatt
attgagcagctgtgggctctgggttactcccctgaggacatcatcggtaacatcttcaga
gtgtgtaagactttccagatgccggagtatctcaagctggagttcataaaggagataggc
tacacccacatgaaggtggcagagggcgtgaactccctgctgcagatggcaggcctcctg
ggtcgactgtgcagcaagacggccaccccggataccagctaa
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