Oncorhynchus masou masou (cherry salmon): 135550822
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Entry
135550822 CDS
T10723
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135550822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135550822
04090 CD molecules [BR:
omm04090
]
135550822
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Nectin family
135550822
CD molecules [BR:
omm04090
]
Proteins
135550822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
C2-set_3
C1-set
Lep_receptor_Ig
LapA_dom
DUF6476
V-set_CD47
DUF4690
Motif
Other DBs
NCBI-GeneID:
135550822
NCBI-ProteinID:
XP_064838027
LinkDB
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Position
12:complement(76481930..76515681)
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AA seq
426 aa
AA seq
DB search
MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCHIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLGKNIYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPTTVSRWPGTQVSTE
KPTATALNWPNTKRSPASTPDSQLSTHSQPAHSVFEATGYTLANDSSSNSTSTTGIFDET
ERQRGNGSSAPLLIFLVTCLILGLLVVVAFFVIKLRRAHILWKKENEESDQSVESSRSKS
SNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTITTNTKTEEAPEIQVIPQTDGATLSPQ
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggttccgttgcagtg
caacatatgaccgtaatggagggtgagactctaactattaagtgtcacattagaaatgct
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtaacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttgggaaaaaacatatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaacaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttaaattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagcactcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagtagcaactcaaccagtactacaggaatcttcgatgagacg
gagaggcagagaggaaatggaagcagtgcaccgttgctcatcttcctcgtgacgtgcctc
atccttggtctgctggtggtcgttgcattctttgtaatcaagctgaggagggctcacata
ctctggaagaaagaaaatgaagaatctgatcaatctgtggagagcagcagatcaaaatca
agcaatgaagagaaacaatccagaagaaggggaaatggactttttaacattggattcaca
aagtatgtcgttgaggaaccaatggcaacagagacgacaataacaacaaacaccaaaaca
gaagaggctcctgaaattcaagtcatcccacaaacagatggagcaaccctaagccctcag
atcaaggagacggaactgtaa
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