Oncorhynchus masou masou (cherry salmon): 135550967
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Entry
135550967 CDS
T10723
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135550967
04082 Neuroactive ligand signaling
135550967
04519 Cadherin signaling
135550967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135550967
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135550967
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF2070
Motif
Other DBs
NCBI-GeneID:
135550967
NCBI-ProteinID:
XP_064838348
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Position
12:84930761..84953017
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AA seq
490 aa
AA seq
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MEMITVDHGFVAVECLRGMAFVFNCFFLSCVSNVWGNHVKSTQTENIYLDNITRVLDRLL
DGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMFFLVEKLRNMDLHSTSTDQKQHEYT
MDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRI
MQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPMSEIVYTWKKGPLFSVEV
PEESSSLLQYDLIGQTVSSERLKSNTGEYVVMTVHFHLQRKMGFFLIQTYIPCIMTVILA
QVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSAL
IEFAAVNYFSTLQANRELRKAASIKAAQEAAEAGRTDGESSSDASSMLKKRMNSTPHFER
PAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTK
DTMEMTRDSV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgataacagttgaccacggctttgtggctgtggagtgtttacgaggcatggct
ttcgttttcaattgtttttttctgtcctgtgtgagcaatgtttggggaaatcatgtgaaa
tcaacgcaaactgagaatatctatttggataacatcacgcgagtattggatagattacta
gatggatatgacaacagactgcgacctggatttggaggtccagttactgaggtcaaaaca
gacatctttgtcacaagctttggtccagtgtcagatgttgagatgtttttcttagtggag
aagttgagaaatatggacctgcacagtacttcaacagatcaaaaacaacatgagtacacc
atggatgtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggccccatc
gagattctgcgtctcaacaacctcatggtcagcaagatctggacgccagacacattcttc
cggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgtttcgcatc
atgcagaacggaactatcctctacactatgagattgacgataaacgcagagtgtcccatg
cgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagctatgcc
taccctatgagtgaaattgtgtacacatggaaaaaaggcccactgttctctgtggaagtc
ccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagtgag
aggttaaaatccaacactggtgaatatgtagtcatgactgttcacttccacctgcaaagg
aagatgggcttcttcttgattcagacatacatcccctgtatcatgaccgtgatcctggct
caggtctctttttggatcaataaggaatcggttcctgcacgaactgtattcggcattacc
acagtgcttaccatgaccacactcagcatcagcgcccgccactctttgcccaaagtctct
tacgccacggctatggactggttcatcgctgtgtgtttcgccttcgtcttctcagccctc
attgaatttgccgcagtcaactacttctccacgctgcaggccaaccgggagctccgcaag
gcggcctccattaaggcagcccaggaggcagcagaggccgggaggaccgatggggagtcc
tcttcggacgccagcagtatgctgaagaagaggatgaactctacgcctcactttgagagg
ccagcggaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggctca
gccgtgccatccaacaacttactgacgggcaccagcatcatagacaagtactctcgcatc
ctcttccctctgtcgttcggggccttcaacctggtgtactggatcgtctatctcactaag
gacaccatggagatgacaagggacagcgtgtga
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