Oncorhynchus masou masou (cherry salmon): 135551094
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Entry
135551094 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135551094
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135551094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135551094
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135551094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135551094
NCBI-ProteinID:
XP_064838573
LinkDB
All DBs
Position
12:94986296..95004571
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AA seq
255 aa
AA seq
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MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGMGGGRGGGDGGGPRG
RYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTY
AVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNSRSRSFSPPRRSRA
SPRYSPRHSRSRSRT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtaggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggac
gttttctacaagtacggagcgatccgggatatcgacttgaagaaccggagaggaggaccg
ccgttcgctttcgtggaattcgaggaccccagggatgctgatgatgcggtgcacggtcgt
gatggttatgactacgatggttaccgtctccgggtggagttcccccgtagtggtcgtggc
ggggggagaggggggatgggcggtggaaggggcgggggtgacggtggaggacccagagga
agatatggacctccatcacgacgctctgagtaccgggtcatcgtctccggtctcccctct
agtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgatgtatgttacgct
gacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggaggacatgacctac
gctgtccgcaagctggacaacaccaagttccgctcccacgagggagagactgcctacgtg
cgtgtgaaggtggatggacctcgcagccccagttacggacgctcccgctctcgtagccgt
agcaacgggcgtagcaacagccgctcacgcagcttctcaccgccgcgacgcagccgggcc
tctccacgctactcgccacgacactcacgctcccgctcccgcacctag
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