Oncorhynchus masou masou (cherry salmon): 135551701
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Entry
135551701 CDS
T10723
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135551701 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omm01007
]
135551701 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135551701 (vars2)
Enzymes [BR:
omm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
135551701 (vars2)
Amino acid related enzymes [BR:
omm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
135551701 (vars2)
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135551701 (vars2)
Prokaryotic type
135551701 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
bHLH_ILI
Val_tRNA-synt_C
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
135551701
NCBI-ProteinID:
XP_064838957
LinkDB
All DBs
Position
13:9130870..9162376
Genome browser
AA seq
1094 aa
AA seq
DB search
MWRSACGLSVRAAERAIHRQCSRRLYSHNAEKPPPQSTPRTQAEKERRRRDKEEAILSSQ
HNNVEDQGMKWSEKERISYSVSTPPGEKKDTTLPFPSSYSPEYVETSWYPWWEKEGFFTP
EINDGLPHAVNRSFSMCIPPPNVTGTLHLGHALTVAVEDALVRWRRMQGYKVVWVPGCDH
AGIATQTVVERRLFRERGKRRQDLSREEFLKEVWTWKKEKGEEIYHQLRKLGASLDWSRA
CFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKQLSGRTMLSV
PGYQNRVEFGTMVTFSYPIDGQDGEVAVSTTRPETMLGDVAIAVHPEDPRYQAIHGKQCR
HPFADRLLPIITDTMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGTMTPLC
GQWLEGVKRFDAREQVIDALTEKMLFRGKRDHAMSLPVCSRSGDVIEPLLKKQWFVRCGE
MAQRAIQAVDEGQLEIIPHFYAKTWSSWLSNISDWCISRQLWWGHQIPAYRVTLSDSTDI
QEEELWVWGRSEEEARERAAGKYGVTADTITLTQDPDVLDTWFSSGLFPFAMLGWPQQTS
DLRQFYPNTILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKHGRKMSKSLG
NVIDPLDVISGISLERLQEKVEEGNLDPRESMVAMEAQRKDFPKGIPECGTDALRFALCS
YKAQGEDISLSVSQVLSCRHFCNKMWQTVRFTLGVLEDRGAELGTVEQTSPLNSMDQWVC
SRLYSTVLQCEQGFERYELHSVTAALHSFWLHSLCDIYLECIKPVLSQDSGAGALGLIDT
VHTGRGSQREKQVVRAVLYHCVSVSLALLSPFMPFLTEELWQRLYLLRGEGGDSAGASLC
LQPYPQSSQLAHWHFPQEEADFTLVQEVVRVARSLRAQCGMTKEKPDMWAVCSPSQAQIL
VHFGPAVRTLGRITKLHLHCPQGAGSLSFPSAPPPPKGSAVGVVDHSCQLHLNVQGGVNV
SKLSLQLSQRREKLLSKLEQSLSRTRVPNYLQKVPERVRIETENRISALEQELRNMEEQL
SALQGPPKHNSGQK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtccgcttgtggcctctctgtgagggcagcagagagggcaatacacagacaa
tgttcacgtaggctctattctcacaatgcggaaaaacctcctcctcaatctactcccagg
acccaggcggagaaagagaggcggaggagagataaggaggaggccatactgagcagtcaa
cacaacaatgttgaagatcaaggaatgaaatggagtgagaaagagaggatatcgtacagt
gtttcaacacctcctggagagaagaaagacaccaccctgcccttcccttcgtcctacagc
ccggagtatgtggagaccagttggtacccgtggtgggagaaggaaggcttcttcacccca
gagatcaatgatggactgccacatgctgtgaatcgctccttctcaatgtgtatccctccg
cctaatgtgactggcacgctgcacctcggccatgcactcacagtggccgtagaggatgca
ttggtccgctggaggaggatgcagggctacaaagttgtctgggtaccaggctgtgaccat
gcaggcatcgctacacagacggtggtggagaggaggttgtttagggaacgagggaagcga
agacaggacctcagcagggaggagtttctaaaggaggtgtggacgtggaagaaagagaag
ggagaggagatctatcaccagctgaggaaacttggtgcgtctctggactggagcagagcc
tgcttcaccatggatccaggcttcagcagtgctgtgaccgaggcctttgtaaggctgtgt
gactctggtctgatctatcgctcagaggggctggtcaactggagctgtgctttggagtcg
gccatctctgatatagaggttgactccaagcagctgtctggcagaaccatgttgtctgtc
cctggctaccagaacagggtggagtttgggaccatggtcaccttcagctaccctatagac
ggccaggatggagaggtggcagtgtcgaccactcgtcctgagaccatgttgggtgatgtg
gccatcgctgtgcatcctgaggaccctcgatatcaggctattcatggtaaacagtgcaga
cacccattcgctgaccgactcttacccatcatcactgacactatggtggacatggagctg
ggtacaggtgctgtaaaagttactccagctcacgaccacactgacttcctgctttcccag
cggcactctcttcctcgcctcactgtgattggaggagacggcacaatgacccctctctgt
ggccaatggctggagggagtgaagcgttttgatgccagagaacaagtgatcgatgcgctg
acagagaagatgctgttcagagggaaaagggatcatgccatgtctttacctgtctgcagt
cgttctggggatgtcattgaacctttgttgaagaagcagtggtttgtgcgttgtggagag
atggcccagagagccatacaggcagtagatgagggacagttagagatcattcctcacttc
tacgccaaaacatggagtagctggctctccaacatcagtgattggtgcatatccaggcag
ctttggtggggtcatcagattccagcctatcgagtgactctctcagattccactgacatt
caggaggaggagctctgggtctggggcaggagtgaggaggaggccagagagcgggctgct
ggaaaatatggagtgactgctgacaccattacactgactcaggaccctgatgtattggac
acctggttctcctcagggctcttcccatttgccatgttgggctggccacagcagacaagt
gacctgaggcaattctaccccaacactatcctggaaacaggaagtgacctcatcttcttc
tgggtggccaggatggtgatgcttggcacagaactgactgggcagctacccttcaaacag
gtgctcctccactctctggtgagggataagcatggcaggaagatgagtaaatctctggga
aatgtcatcgaccctttagatgttatctctggcatctctctggagaggctccaagagaaa
gtggaggagggcaaccttgatccccgtgagagcatggtcgccatggaagcgcagaggaaa
gacttccctaaggggatcccagagtgtggtactgacgcgctccgcttcgcactctgctct
tacaaggcccagggtgaggacatcagtctatccgtgtcccaggtgctgagctgtagacac
ttctgtaacaagatgtggcagacagtgagattcacgctgggtgtcctggaggaccgaggg
gctgaactgggaacagtggaacagacctctcctctgaacagtatggaccagtgggtttgt
tctcggctctatagcacggtgctccagtgtgagcagggctttgagagatatgaactccac
tctgttaccgctgccctgcactccttctggctgcacagcctctgtgacatctacctggag
tgcatcaagccagtgctgagccaggactctggcgccggggcgttgggtctgatcgacaca
gtgcacactgggagaggtagccagagagagaagcaggtggtcagggctgttctctaccac
tgtgtgtctgtctctctggccctcctctctcccttcatgcccttcctcactgaggagctg
tggcagaggctctaccttctcaggggagagggtggtgatagcgccggagctagcttgtgt
ctacagccatacccacagtcttcacaactggcacactggcacttcccccaggaggaagca
gacttcactctggtccaggaagtggtgagagtagccaggtccctcagggcccagtgtggc
atgaccaaggagaagcctgacatgtgggctgtgtgttcgcccagccaagcccagatcctg
gtccactttggccctgctgtacggaccctgggccgaatcaccaagctccacctccactgt
cctcagggggccggctccctgtccttcccgtcggctccccctccccctaaaggcagtgct
gtgggtgtggtcgaccactcctgtcagttacacctcaatgttcagggcggtgtgaatgtg
agcaaacttagtctccagctctcccaacgcagagagaagctcctgtctaaactggaacag
tccctctctcgaacccgtgtgccaaactacttacagaaggttccagagcgagtgaggata
gagacagagaacagaatctcagctttggagcaggagctgaggaacatggaggagcagctg
tcagcactacagggacctccaaaacacaactctggtcaaaagtag
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