Oncorhynchus masou masou (cherry salmon): 135551710
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Entry
135551710 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135551710
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135551710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135551710
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135551710
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135551710
NCBI-ProteinID:
XP_064838968
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All DBs
Position
13:complement(10050580..10061899)
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AA seq
398 aa
AA seq
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MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGGGGGGGGRSGGGYGRGGRDRYGPPAR
TDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLD
GTEVNGRKIRLIEDRPGAKRSKRSYSRSRSRSRSRSRRSLKSRSRSESSSRSRSRGAASR
SRSRSHSKKDKTKGRREEERTNGAHKAKDVGRSRSRSKSCSKSKKSSKKEGKKSRKDESR
SRSRSRSRSAAKDRSRKSGSKSREPAKSDNEAAAAEKGAPRSRSHTPTESKPKSKSKSKS
PSPSPAKARSRSPSVSRSESRSKSRSASRSRSRSRSQS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacatcggaagattgagctatcgagcaagggaaaaggacgtcgagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctatggc
tcaggaggaggaggaggcggcggaggagggggaggaggaggaggaggaggaggtggtggt
ggaagaagcgggggcgggtatgggcgtggtggcagagacagatatggcccaccggcaagg
acagactatcggctgatcgttgagaacctgtccagtcgctgcagctggcaggacctgaag
gactacatgaggcaggcgggtgaggtgacgtatgctgacaccaataaggggcgcaggaac
gagggagttatagagttcaggctgtactctgacatgaagagagccctggagaagctggac
ggcacagaggtgaacggcaggaagatccgactgattgaggaccgccccggggccaagcgc
agcaagcgctcttactctcgcagccgttccaggtctcgctccaggagccgcaggtccctt
aagagccgcagccgcagtgagagcagcagtcgctcacgctccaggggtgctgcctcccgc
tcacgtagtcgctcccacagcaagaaggacaagaccaagggccgcagagaggaggagcgc
accaacggtgcacacaaggccaaggatgtgggccgcagtaggagtcgcagtaagagctgc
agtaagagcaaaaagagcagcaagaaagaagggaagaagagcaggaaggatgagtccagg
tctcgttcccgctctcgctctagatcagcggccaaggatcgctccaggaagtcaggctcc
aagagccgtgagccggccaagagcgacaacgaggcagctgcagccgagaagggggctccc
cgctctcgctcccatacgcccactgaatccaaacctaaatccaagtcaaagtccaaatct
ccatctccctccccggccaaagcccgctcccgttccccctccgtctcccgctcagagtcc
cgctccaaatctcgctccgcttctcgttctcgctcccgttctcgatcacagtcctga
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