Oncorhynchus masou masou (cherry salmon): 135551974
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Entry
135551974 CDS
T10723
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
omm
Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecule (CAM) interaction
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135551974 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135551974 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omm00535
]
135551974 (sdc3)
Proteoglycans [BR:
omm00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
135551974 (sdc3)
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Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
135551974
NCBI-ProteinID:
XP_064839370
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Position
13:24412530..24455083
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AA seq
439 aa
AA seq
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MKLPPCLMTILAALLAHSALGQTWVPSIELEGSSGDDEFYDDEDLFSGSGSGFPEMKVNP
TAVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGR
ERERERERERVREMERERERERERDREREREKERERERERERQREIERERERERERARAA
QTTISPRGPAAVPMATTSTATPLVESVAPSSGVQDLVTTEEEEEDVYLSPDPTTSMPMET
TTEEEEEEEEEEEEVTTTDTETTPLPKTTAPPTTIGPALTERSSSAPFRPSVLVTTPIKA
APTERSTRPQQPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGN
TINTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEE
PKQATVTYQKADKQEEFYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgccgtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcaaacctgggttccgtctatagaattagaaggttcttctggagatgatgagttctat
gacgacgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccct
acagcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggct
actggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctc
cccaccccactacccactgagggagagggggagagtgggatagagtgggagagagggagg
gagagagagagggagcgggaaagagagagagtaagggagatggagcgggagagagaacga
gagcgggagagggatagagagagggagagagaaaaggagagggagagagaaagagagaga
gagaggcaacgggaaatagagagggaacgagaaagagaacgtgaaagagcgagagccgcc
cagaccaccatctcaccccgtggcccggcggctgttcccatggcgaccaccagcacagcg
acacctctggtggagagtgtagcaccctctagtggcgtgcaggacctggtcaccacagaa
gaagaggaggaggatgtctacctgtccccagaccccaccaccagtatgcctatggagacc
accacggaagaagaagaagaagaagaagaagaagaagaagaagtgaccactacagataca
gagaccacacccctcccaaagacaacagctccacccactacgattggcccagccctaact
gagaggtctagctctgccccctttaggcccagtgttctggtgaccacgcctattaaagcc
gcacccacagagaggagcacacgcccacagcagccttctacgacaatgaataatgaatta
ggggttaatggacccagcggagactttgagatccgggaggaggaccgtcgccagggcaac
gaggttgttggtcgtggccttggcatggagactggggcagaacctgatctgattggcaac
acaattaacacaggaagttctgctgctcaacttcctcagaagaacatcttggagaggaag
gaggtcctgatagcggtgatagtggggggcgtggtgggggccctgtttgcagcgttcctc
gtcatgctgctggtgtacaggatgaagaagaaagatgaaggcagctacacactggaggaa
cccaagcaagccaccgtcacctaccagaaagctgacaaacaggaggagttctacgcataa
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