Oncorhynchus masou masou (cherry salmon): 135551986
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Entry
135551986 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135551986
04121 Ubiquitin system [BR:
omm04121
]
135551986
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135551986
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135551986
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135551986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
135551986
NCBI-ProteinID:
XP_064839386
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All DBs
Position
13:complement(24858318..24910224)
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AA seq
839 aa
AA seq
DB search
MASFSDSDLQTCPLCKELCGSSSTPISSNSSTSSSSSHSSSSSLTSRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLSCPTCNQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEEQLQLGQN
INGHHRGVSGGSIPGFHHPHGGLLRPHRLGEPTCSSCDEGNPASSHCLDCQEYLCDNCVR
AHQRVRLTKDHFIERLAESLHQHQAGRGKVIPIGGGGEGGGGVGVSLAQSFHYNFSLLPL
FQDRMSFCQNHDSEVFLFFCETCSVPICRECSVGRHVGHSFVYLQDAVQDSRAITIQLLA
DAQQGRQAVQLSMEKAQAIVEQVEIKAKVVQTEVKNIILRHKKALEERECQLLWRVEKIR
QLKAKSLYLQVEKLHQNLTKLDSTIAAVTQVLDEGRHLDVLLARERMLTQIQELKSLRGL
LQPQEDDRFMFMPPDQALYIAIQSMGLISSGAFATVTKAHGEGLKTALRGKPASFTVIGY
DHDGEPRLSGGDAVSAVVMAAVDGNLSAAEVCDHLNGSYTVSYLPKAEGEYLVSVLVCNQ
HIMGSPFKVLVKSGRSYGALGSPVSAFGGEGEGEGQLCRPWGISVDKEGYVVVADRSNNR
VQIFKPCGAFYHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFDGQFMLK
FGEKGTKNGQFNYPWDVAVNSAGKILVSDTRNHRVQLFGPDGSFINKYGFEGALWKHFDS
PRGVAFNHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRII
VADSRNHRVQVFEPNGNFLCKFGMQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattctcagactccgacctacaaacctgtcctctctgcaaggagctctgtggc
tcctcctccactcccatttcctccaactcctccacctcatcctcctcatctcattcctcc
tcctcgtcgttaacctcccggcgcctccatgtcctcccctgcctccacgccttctgcagg
cagtgtctggagggccagcgcagccctggggaccctctcaaactcagctgccccacctgc
aatcagaaggtctccatctccgaagccggagtggactccctcccttcctccaacttcctc
ttcagtaaccttctggatgtggtggtgagctccgaggagcagctccaactcggccagaat
atcaacggccaccatcggggggtcagcgggggctccatacccgggttccaccacccccac
ggcggactcctccgcccacaccgcctgggagaacctacgtgtagctcctgtgacgagggg
aacccggccagctcccactgcctggactgccaggagtacctgtgtgataactgcgtccgt
gcccaccagagggtccggctgaccaaggatcacttcattgagaggctagctgagagcctg
caccagcaccaagcgggtcgaggcaaggtcatccccataggaggaggtggagaagggggg
ggaggcgtgggcgtctccctggcccagtcctttcactacaacttctccctgctacctttg
ttccaggacaggatgagcttctgtcagaaccacgacagcgaggtgtttctgtttttctgt
gagacgtgctcggtgccgatctgtagggagtgtagtgtgggcagacacgtaggccacagc
ttcgtctatctacaggacgctgtccaggactccagagccatcaccatccagctactggcc
gacgcacagcaaggaagacaggctgtacagctgagtatggagaaagcccaggccatagtg
gagcaggtagagatcaaggccaaggtggttcagacagaggtgaagaacatcatcctcaga
cacaagaaagccctggaggagagagagtgtcagctactctggagggttgagaagatccgc
cagctgaaagccaagtctctgtacctgcaggtagagaagctgcatcagaacctgaccaag
ctggacagcaccattgcagccgtcactcaggtgctcgacgagggccgtcacctggacgtg
ctgctggccagagagcgcatgctgacccagatccaggagctcaagtctctcagaggcctg
ctgcagccacaggaagacgacaggttcatgttcatgcctccagaccaggccctgtacata
gccatccagtccatggggctgatcagtagcggagcgttcgctaccgtcaccaaagctcac
ggagagggcctaaagaccgcactccgcggcaagcctgcatccttcaccgtgattggctac
gaccatgacggggagccccgcctctcgggcggtgacgcggtgtcagcagtagtgatggca
gcagtggatggtaacctgtcggctgccgaggtgtgtgaccacctgaacgggtcatacaca
gtcagctatctgcccaaagcagagggagaatatctggtgtcagttctggtctgtaaccag
cacatcatgggtagcccctttaaggtgctggtgaagtctgggcggagctatggcgccctg
gggtccccggtgtctgcattcggaggtgagggggagggggaggggcagctgtgtcgcccc
tgggggatcagcgtggacaaagagggatacgtggtcgtggccgaccgcagtaacaaccgc
gtacagatctttaagccgtgcggtgccttctaccacaagtttggctccctgggttctcgc
cccggtcagtttgaccgtccagcgggcgtggcatgcgacagccaacgccggatcatcgtg
gcggacaaagacaaccaccgcgtgcaggtgttcactttcgacgggcagttcatgctcaag
ttcggcgagaagggcactaagaacgggcagttcaactacccctgggatgtggcggtgaat
tctgcagggaagatactggtctctgacaccaggaaccaccgtgtccagctctttggccct
gatgggtccttcatcaacaagtacggctttgaaggcgctctgtggaaacactttgactca
ccgcgcggcgtcgccttcaaccacgaggaccacctggtcgtcaccgacttcaacaaccat
cgtctgctggtgatccggccggactgccagtctgcccggttcttgggctcagagggaacc
ggtaacgggcagttcctgcgtccgcagggcgtggctgtggaccaggagaaccggatcatc
gtggctgactcgaggaaccaccgggtgcaggtattcgagcccaacgggaacttcttatgt
aaatttggtatgcaagggagtggctttggacagatggaccgcccctccggtgttgccgtg
acgcctgacggagtcatcgtggtcgtcgattttggaaacaaccgcatcctcaagttttga
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integrated database retrieval system
