Oncorhynchus masou masou (cherry salmon): 135552038
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Entry
135552038 CDS
T10723
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135552038
04081 Hormone signaling
135552038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135552038
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135552038
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135552038
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
135552038
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ntox3
CpXC
Motif
Other DBs
NCBI-GeneID:
135552038
NCBI-ProteinID:
XP_064839479
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Position
13:27683050..27859261
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AA seq
396 aa
AA seq
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MSEQGDKCTTPRWKHEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRT
IQKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEE
NRERRRKDELQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLSAVGVKET
KPEDIGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILL
KGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFHL
DDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHYINYRKHKVAQFWPKLLMKV
TDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcaccaccccccgctggaaacatgaggccatgcaaaat
gggtacatccccagttacctggacaaggacgagttatgtgtagtatgtggggataaagct
acaggatatcactatcgctgtatcacctgtgaaggatgcaagggtttcttccggcggacg
atccagaagaacctgaacccgacgtacgcttgtaagtacgaggcaaagtgcgtcatcgat
aaggtgaccaggaaccagtgccaggaatgccgcttcaagaagtgcatcgctgtcggcatg
gcaacagacttggtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggag
aaccgtgagcggcggcggaaggatgagctccagaagacggtgtgggaccggcctgagccg
tcccaggaggagtgggacctgattcgcatggtcaccgaggcccacatgtcaactaacgcc
cagggcaaccactggaaacagaaacgcaagttcttgagtgcagtgggggtgaaggaaacc
aagcctgaggacattggtcaagcaccggtcataaatgcacctgaagggagcaaagtggac
attgaagccttcagtcagtttacaaaaattatcacccccgccattacccgagtggtggac
tttgccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagattatcctattg
aaaggctgctgcatggagatcatgtctttacgggcggccgttcgctatgaccccgagagc
gagacgctgacacttaacggggagatggccgtgacccgcggccagctgaagaacggaggc
ctgggtgtggtgtcggatgccatctttgatttgggcgtgtcgctgtcgtcgttccacctg
gacgactctgaggtcgctctgctacaggccgtcatcctcctgtcctccgaccgtccgggg
ctgaccagcgtggagcgtattgagcgctgtcaggaggagttccttctggcctttgaacat
tacatcaactaccgcaaacacaaggtggcgcaattctggcccaagctgctgatgaaggtg
acggacctgcggatgatcggggcgtgccacgcctcccgcttcctgcatatgaaggtggag
tgccccaacgaactcttccccccactcttcctagaggtttttgaggattga
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