Oncorhynchus masou masou (cherry salmon): 135552065
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Entry
135552065 CDS
T10723
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135552065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135552065
03021 Transcription machinery [BR:
omm03021
]
135552065
03036 Chromosome and associated proteins [BR:
omm03036
]
135552065
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135552065
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135552065
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135552065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135552065
NCBI-ProteinID:
XP_064839514
LinkDB
All DBs
Position
13:complement(29767342..29938329)
Genome browser
AA seq
2435 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHENKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHQGSFPPPPYGYNQHYSRG
PFHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSQDHGFPNHFNNYSPFPNRTSYQGQGY
AMNSPRNSQPPAAGGQQGKQQPAGGTTAMPASYNNQRYNMGNAQPTSTPTLNQLLTSPSS
TRSYQNYPQGEYSNQEGAGKGAADIASSQYGGGHPGWQQRSHQPPPMSPGNTGQPLNRNQ
PPSPMDHVGKMRGQGYGGANPYSQQQGQGQGPPPPGAQQGASYPGQGYGPQGPQRYPMGM
QGRTPTGMAGMQYGQQMAGFGQQGPGGYGQQSQGYYSQHGPPPHAGQQQAPYPQQVHPSQ
GQGPPQGGPPQAQPPYNQGPPQPSQQPGPQQGQSGPSYPQQQGPLGQQSPQQQPPSQQQG
PPQQQQDRAAPPQAQPPPGHQQPPVHKPSPGHQSTPGPQGQHPSPGHSVPPQQQGQSQQG
QPSPYSQTPPLQQQGQSQQGQTSPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQGQSQQG
QPSPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQGQSQQGQTSPYSQTPPLQQQGQSQQG
QTSPYSQTPPLQQQGQSQQGQTSPYSQTPPLQQQGQSQQGQTSPYSQTPPLQQQGQSQQG
QTSPYSQTPPLLQQSPFQGFPPPPQELSQDSFSSQSSAPPSNQPTTSNKSGTEDSMQGRP
SSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPS
PSPVGSPASVTPSRSGPISPAAVPGNQMPPRPPSVHSDGILHTSMGQSAMGQDRVYMRNP
QMPPHGSPQQPGSALSPRQSSGGQMLPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYS
GMPNANYPGGPGGMPGQAGGAPYAGMPPGRMGPGQMAARPYGPGMGPNMGPGMPPQVTSG
MCPPPGMNRKGPGGPPDVASTMHHGANSILNRPPGYPPNMPQGMMGAGPPYGPGPGAINS
MQGMMNQGGPYGGGPMGGNMANNTPGMAPSPEFGIDVKLNPAQKMNNKLDGTPKPEAKKV
KKKSNSSTTTNEKITRLYELGPEPERRTWVDRYLAFAEEKATGMTNLPAVGRKPLDLFRL
YVSVKEIGGLTQVNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPP
PDLFIDAKKTTQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPP
MPVRLQDPFADGGDPAFARRNSMTPNSYQPGMGGPEMMGHMGPYESNKDPFGGMRKAGEQ
FMTPGPGPNSGMEGQFNRGPPGPNMQMGPRQQYPYGPGYDRRQEPGMGPGAPQPNLMPSG
ADSGMYSPNRPPPQQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRPPVDGAYG
PPAKRHEGDGMYNVPFSGQQPGPQPSGGPQGQQDMYNQYNAGYPGSDRRPPGPQGQFPFS
FGRDRGPSSGGPNSQSPMPPQMMGSPMQAAPDGPQGPMWQGRNEMGYPNYPNRQGPPGPG
QGPPQGYHGMNRSEEMMPGADQRMNHESQWPGHPSQRQSPYGPGGSGPPMSRPLQSNYQS
SQNHISQVSSPAPMPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRR
DISFPPGSVEASQPILKPRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYD
DNSISTFNLCQLPGFLELVVEYFRRCLIQIFGILKEYEVGDPGQRTLTDPYAADEDWSDE
ELPEQEDMEDEEDEEEDDERRSNADTTTSSQQVQVKKEEEEEKSTPEKSTAEEEEEREGG
ESSSTSSPPQNLSLLQEKPKQASKFDKLPIKMVRKKDPFPGGRSSKLGRRQSFDSGLIHW
SIGGGDTTEHIQTHFESRSDLLRQRKQVLPSATESRKVAVPPTVSDNPEKTTKPGKEEQT
TKTSTPTTPAPVTATIDDVLSARPGSVTEEAVRGAAEEQKESGGQFLYSLRQAQQSRRNI
TILEDEPHSKDETALSTLSDWQDALARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLG
RLVLLHHRHPERKQAPVTYEKEEEEDEDERISCERDEWWWDCLEVLRENCLVTLANISGQ
LDLSIYPESICLPLLDGLLHWAVCLSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDN
NVDLILATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKA
SVGNLLGFLEDSLAATQYQQSQSSLMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSE
FTLYESRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgaaaataag
gaacctggatctgacaacggatctccgggccagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaactcgtcccgagtgaat
aataataacaaccagaatgatacggggggaccggaggggaataaccaccccgggatgggc
caccaccagggctcattccctccacctccttacgggtacaaccagcactacagccggggc
ccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccggca
gtgcagtcaggcaacatgatggacccatacccgcccaactcacaagaccacggcttcccc
aaccattttaacaactacagccccttcccgaaccggacttcttatcagggccaaggatac
gccatgaattccccgcgtaatagccaacccccggcggctggggggcagcagggcaagcaa
cagccagcaggcggaactacagccatgcctgcctcgtacaataatcagaggtataacatg
ggaaacgcacagcccacgtctaccccgacattaaatcagctcctaacgtctcccagctct
acgaggagctaccagaattacccacaaggagagtatagtaaccaggaaggggctggcaag
ggagcagcagatattgccagcagtcagtatggtgggggtcatccgggttggcaacaaagg
agccaccagccgcctcctatgagcccagggaacacgggacaacctctgaacagaaaccag
ccccccagccctatggaccatgtagggaagatgcggggccaggggtacggtggagccaac
ccctactcccagcagcaaggccaggggcagggccctcctcctccaggggcccaacagggt
gcctcctacccaggccagggctatggaccccaggggcctcaaaggtatcctatgggcatg
cagggacgcacccccaccggcatggctggcatgcaatacggacaacagatggccggcttt
gggcagcagggtccagggggctacggtcagcagagccagggctactacagccagcatggc
cccccaccacacgctggtcagcagcaggccccctacccccagcaggtccacccctcccag
ggccaagggcctccgcaagggggtccacctcaggcacagccaccctacaaccagggacca
ccccagccctcgcagcagccggggccccagcagggccagtccgggcccagctaccctcag
cagcaaggacccctggggcagcagtctccacagcagcaacccccctcgcagcagcaagga
ccgccgcagcagcagcaagatagggcggcccctccacaggcccagccacccccaggccat
caacaacccccagtccacaagccatcccccggccaccaatccactccgggccctcagggc
cagcacccatctccaggtcacagtgtacccccacagcagcagggtcagtctcagcagggc
cagccctcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagccctcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagccctcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagccctcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagacaccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagaccccacccctgcagcagcagggtcagtctcagcagggc
cagacctcgccctactcccagacaccacccctgctgcagcagtcgcccttccaggggttt
ccaccgccgccacaggagctctcccaggactcgttcagctcccagtccagtgctcccccc
tccaaccagcccacgacttccaacaagagtggcacagaggacagcatgcagggacggcct
tctagtttaccagacctctctggttccatagatgacctgccgacgggtacagagggggct
ctgagtccgggggtcagcacgtcgggggtgtccagtagccagggggaacagagtaaccct
gcccagtcacccttctcccctcacacctcgcctcacttgcctggcatccgcgggccctcc
ccctcccctgtgggctcccctgccagcgtcaccccctcacgctccgggcccatctcacct
gctgctgtgccaggtaaccagatgcctccccggccgcccagcgtccattcagacggcatt
ctccacacatccatgggccagtcagccatgggccaggacagggtgtacatgcgtaacccc
cagatgcccccccacgggtcgccgcagcaacctggctccgccttatcccctcgccagtca
tcgggaggccagatgcttcctgggatggggccctaccctcagaacaactccatggggaac
tacggccctcagggtggacagtacggaccacaaggttaccccagacagcctggctacagt
ggcatgcccaacgccaactaccctggtggtccggggggcatgccaggccaggctggtggg
gcgccgtatgcaggcatgccccctggcaggatgggtccgggtcagatggctgcccgcccc
tacggccccgggatgggccccaacatgggccccggcatgcctccacaggtgacctctggg
atgtgcccccctccaggaatgaacaggaagggccccgggggccctccagatgtagcctct
accatgcaccatggagccaactctatactcaacaggcctccaggttacccccccaatatg
ccccaagggatgatgggagcagggcctccgtatggccctgggccgggggccatcaacagc
atgcaaggtatgatgaaccagggaggaccttatggaggagggccaatgggagggaacatg
gccaacaacacacctggcatggctcctagccctgagtttggcatcgatgtcaaactgaac
ccagcccagaagatgaacaacaagctggacggtacgcccaaacctgaagccaagaaggta
aagaagaagtcaaactcttcgacgacgaccaatgagaagataactcgtctgtatgagctg
ggtccggagccggagaggaggacgtgggtagaccggtacctggcgttcgctgaggagaag
gccacgggcatgaccaaccttcccgccgtgggacgcaaacctctggacctcttcagactt
tacgtctcggtcaaagagatcggcggcctcacacaggtgaacaagaataagaagtggagg
gagttgtccaccaacctaaacgtgggcacgtccagcagcgccgccagctctctgaagaag
cagtacatccagtgcctgtacgccttcgagtgcaagatcgaacgtggcgaggacccgccc
ccggatctcttcatcgacgccaaaaagaccacccagcccaagatccagccccccagccca
gctgggtctggatctctgcagggcccccagaccccccagtccaccagtagttccatggcg
gaggggggagacctgaagccccccacgccagcctccacccctcacagccagatgcccccc
atgcctgtcaggctgcaggacccatttgcagatgggggtgacccagcatttgccagacgg
aactccatgacccccaacagctaccagcctgggatgggaggcccggagatgatgggtcac
atggggccctacgaatccaacaaggacccctttggtggcatgaggaaagctggagagcaa
ttcatgactccagggccgggccctaacagtggtatggaggggcagttcaacagaggcccc
ccaggccccaacatgcagatgggtccgagacaacagtacccctacggacctggatatgac
aggagacaggagccagggatgggtcctggggccccccagcccaacctgatgccttcaggg
gccgactcggggatgtactcccctaaccgacccccaccgcagcaacgtcatgattcctat
ggtaatcagtatcctggtcaaggagcgccacctggtggcccctaccccaatcagcagcca
ggaatgtttccacagcaacaacccaactacaagcgtcctccagtagacggggcctacggt
cccccagccaagcgtcatgagggggatgggatgtacaatgtccccttcagcggtcagcag
ccagggccccagccctccgggggcccccagggccaacaagacatgtacaatcagtacaac
gcaggctaccccggctctgaccgccgaccacctggcccccagggccagttccctttctcc
ttcggccgagaccgggggccctccagcgggggccccaactcccagtctcccatgcctccc
caaatgatgggcagccctatgcaggcagcccctgacggcccccagggccccatgtggcag
ggacgcaatgagatgggttaccccaactacccgaatcgccaggggcctccaggacctggc
caggggcccccccaggggtaccacggcatgaaccgctctgaggagatgatgccaggggct
gaccagcggatgaaccatgagagccagtggccgggacaccccagccagaggcagtccccc
tacgggccggggggctcggggccccccatgtccagacccctgcagtccaactatcagagc
tcccagaaccatatttcccaggtgtccagccccgcccccatgccccgccccatggaaagc
aggacatccccctccaagtctccatacatgcactcaggcatcaagatgcagaaggcgggg
ccccctgtgcccgcgtcccacataggccaggcccccgtgcagccccccctcatcaggcgg
gacatatccttccccccggggtcagtggaggcctcccaacccatcctcaaaccccgagga
cgactcaccatgaaagacatcggcaccccagaggcctggagagtgatgatgtctctgaag
tcaggcttactagcagagagcacgtgggccttggacaccattaatattttactctacgat
gacaacagcatttctaccttcaacctctgccagctgcctgggttcctggagctggtagtg
gagtatttcagacgctgcctcatccagatcttcggcatcctgaaggagtacgaggtggga
gaccctggccagcggacgctcaccgacccgtatgctgccgacgaggactggtctgacgaa
gagctgcccgagcaggaggacatggaggacgaagaggacgaagaggaggacgacgagagg
aggagcaacgcagacaccaccacctcgtcgcagcaggtccaggtgaaaaaggaggaggaa
gaggagaaatccacgcctgagaagtcgacagcagaggaggaggaggagagggaaggaggg
gagtcttcttccacctcctcgcccccccagaacctcagcctcctacaggagaaacccaaa
caggccagtaagttcgacaagctgcccatcaagatggtgcgtaagaaagaccccttccct
gggggccgttccagtaagctaggccggcggcagagctttgacagcggactgatccactgg
agcatcggcgggggggacaccacggaacacatccaaacacacttcgagagccggtccgac
ctcctcaggcagaggaagcaggtgctgccatcggccaccgagagtagaaaggtcgccgtg
cccccgacggtgtcagacaacccagagaagactactaagcctggcaaggaagagcagacc
accaagacctccaccccaaccacgcccgccccggtcaccgccaccatcgacgacgtcctg
tcggcccggccgggctcggtgacggaggaggcggtgcgaggagcagccgaggagcagaag
gagagcgggggacagttcctgtactccctccgccaggcgcagcagagccgacgcaacatc
accatcctggaggacgagcctcacagcaaggacgagaccgcactgagcacgctgtcggac
tggcaggacgccctagctcgccgctgtgtctgcgtctccaacatcgtccgctcgctgtcc
ttcatccccggcaacgacctggagatgtccaaacacccagggctgctactgctgctgggc
cgtctggtcctgctccaccaccgtcacccagagaggaaacaggcccccgtcacctacgag
aaggaggaggaggaggacgaggacgagaggataagctgtgagagggacgagtggtggtgg
gactgtctggaggtcctcagggagaactgcctggtcactctggctaacatctccggccag
ttggacttatccatctacccagagagcatctgtctgcccctgctggacggcctgcttcat
tgggctgtttgtctttcggccgaggccctggaccccttccccatgctggggccccacggg
gccctatccccccagagactggtgctggagactctcagcaagctgagcatccaggacaac
aacgtggaccttatcctggccacgcctccattcagccggctggagaagctgtacgggacg
ctggtgcgtttggtcggggagaggaaggtggctgtctgcagggagatgtctgtggtctta
ctggccaacctggcccagggggacagcatggcggccagggccatcgccgtgcagaaggcc
agcgtaggtaacctcctgggcttcctggaggacagtcttgcagccacgcagtaccagcag
agccagagttccctgatgcacctacagggggcgcactttgagcccactagcgtagacatg
atgcggcgagcggcccgcgccctgcacgccatggctaaggtggaggagaaccactcagag
ttcaccctgtacgagtcccgcctactggacatctctgtctcaccactcatgaactctctg
gtgtcccatgtgatctgtgacgtactctttctgattggccagtcatga
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integrated database retrieval system
