Oncorhynchus masou masou (cherry salmon): 135552178
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Entry
135552178 CDS
T10723
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
135552178
NCBI-ProteinID:
XP_064839707
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Position
13:36005995..36102865
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AA seq
1034 aa
AA seq
DB search
MVPPKRMRRRLLLAALTLTSCLLSAMATPFPKDLEPINVVGWEHSYLCPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQEDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPENCHADVLATTRNQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFSLGSSRSVTQQVFPFSHS
LTNGQALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDAAA
ASSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQDGGGLPPHQLLTR
MNSSGGGGGGVGCEVHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPHFL
PATSPVNEQGKYNY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccgaaacggatgaggaggcgtctcctgctggcagccctcacactcacttcc
tgtctactgtccgccatggccacgcccttccccaaggacctggagccaatcaacgttgtt
ggatgggagcactcctacctatgtccagggttccaggggctggtgtcggacaatgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacattgct
gccagggaccatgtctttgcagtaaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccccacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcgcgctgtcccttcgagtcgggccaatccaacctt
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttccttgccagcgac
gctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattatgtttac
ttcttcctcagtgagattgcagtggagtacaccacactgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaaggcgcggctcaactgctcggtgcccggcgactccttcttctacttc
gacgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggctcagcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgactcagcctgg
accccagtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggtgatggc
ccggcctcggcctacaagtcatccatcaacttccccgacgacacgctgaccttcatcaag
tcttacccgctgatggacgaggccgtgccctccgtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctgactcagattgcggtggacacctctgccggaccgtctaag
gaccgcactgtagtctttctgggctctgaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcctcctttggctcccaactcttggaggacattgatgtctataacccc
tctaagtgcaacgttcaggggcaggaggacaggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactcagccgc
tgcaccgagcacggcgcctgcaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggactgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgaaaactgccacgcagatgtgctggcgacc
acacgaaaccagaactccgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagcgtccattacaccctcctgatcgcctgcgttctggtggccttc
ttcctcggcgccatcctctccggcttcttggtgtcatgctactgcagtcacaacgcccgc
cgtgcccaccggcttggcaaggaccctgaggcgtccatccaccccgccctctcgttgcgc
agcctggccaagctaaacggcctgctggacggccagcccaaagaggagaagctggacgtg
tccacgcccaagatgtacagctccttcattcccagtgggaaggagcacactccagagaga
cacgggatgtccctgggagacccggaccttaatctctcccaaggggagaacctctcgggc
ctgcccaccccagactccaccccggagctgcccatcaagaacatgaaggctttccggaac
cagtgggagaggaaccagaactgcaacaacgccaaggagtccaaggcaccccccggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccaagccctggggcacctgcctgaggagaggaagatccccaacgatgag
cgtgcgcagggggcttcggcctcccactcctgctgcccgcagacggtggtggacgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcctcgggcagccgcagcatc
actgtgctgacctcaccatgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccccgagacggagtcagccacgtactacagctcc
tccaccctgcccagggacagtctgacccgccgcctggacgtgcccccggacgccgccgcc
gcctcctcggccggcgccaccccactgcagcagcagtccatccccgagcgaagcgcagtg
actcgccaccactcccagaggcacttaatgatcaagatgggcaacggaggggccgtcccg
cgccaacacagcttcagacaggacgggggtgggctaccgccccaccaattgctcacccgg
atgaactcgtcaggtggtggcgggggaggggtcggctgtgaggtccaccagccgctcatc
cccagtgcctgcctgacacggcagcacagctacagcgaaccgccgcaccttcaccgcgca
gccatcgtacgccgcacggcctccctcaagccccaagtgccccccaagccccacttcctg
cctgccacttcgcccgtaaatgagcaaggcaagtacaactactga
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