Oncorhynchus masou masou (cherry salmon): 135552191
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Entry
135552191 CDS
T10723
Symbol
col14a1b
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omm00535
]
135552191 (col14a1b)
Proteoglycans [BR:
omm00535
]
Extracellular matrix (ECM) proteoglycans
Others
135552191 (col14a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_nematode
DUF4959
VWA_3
DUF4992
YPEB_PepSY1-2
Motif
Other DBs
NCBI-GeneID:
135552191
NCBI-ProteinID:
XP_064839729
LinkDB
All DBs
Position
13:36419599..36512595
Genome browser
AA seq
1909 aa
AA seq
DB search
MPATGLKTWVWNPLLCLALISLSPAPAPAQGQVATPRRLRFKVLSATQLHVSWKEPKGDF
ESYRFIYSTQSDAEETELDVTKKEAKVIIDFDPRQLYTVKVTAVKGAQESKPLLGTFEAQ
LSEPDVKNVQPQNVRPKNQKDTSITEENNEISEEQFMCKTPAIADIVILVDGSWSIGRIN
FRLVRMFLENLVSAFHVEFDKTRIGLAQYSGDPRIEWHLNTFTTKEAVIDAVKNLPYKGG
NTLTGLALTYILENSYKPESGSRAGVPKIGILITDGKSQDDVQPPARSLREAGIELFAIG
VKNADEKELKAIGSPPEETHVYNVADFSVMSSIVEGLTRTVCDRVEQLDKAIKGDTGPEV
TMAAPRDLVTSEVTARSFRVSWTHAPGTVEKYRVVFYPASGGQPEEKVVQGTVDTVVLNY
LLSLTEYQVAVFAIYASSASEALRGSTTTLALPMVNNLELFDITHNSMRARWRVAEGASG
YMILYAPLTEGDAADEKEVKVAETVNEVELENLTPDTEYTVTVYAMYGEEASDPMTSQET
TLPLTPARNLRFSDVDHSSARLTWEATSKKANGYRIMYVKTNGVQTNEMDVGRITTLLLR
NLTSLTEYTVAIFAIYDEGQAEPLTDSFTTKTVPEPLNLKTSEVSTESFRVTWEHSAQDV
VLYRLTWTPTRGGDTKEMLVNGNRNSHLLTGLRPITEYEVSLIAVFRNEEESDAVTLTES
TVARTTTTTKATTTTTTTRATTTAVVHLGARNLLLSDHTTFSMEVSWELQDRNVRQYRVA
YVTARGDRAEETKMVPGGQNSLLLQPLLSDTEYKVTVTPVYTDGDGPGVSRMGRTLPLSA
PRNLRVSEEWYNRFRITWDTPPSPTMGYRVVYKPISAPGPALETFVGEDVNTMLILNLMS
GTEYGVRVIASYTTGSSEALTGKARTLYLGVTNLNTYQVRMNSMCAQWSSHRHATLYRVV
IESLLNGHKQEARLGGGATRHCFNDLTANTQYKISVYAQLQDTEGPAVTTTERTFPVPTP
APTRPPTTTPPPTIPSTKEVCKAAKADLAFLVDGSWSIGDESFLKIIRFLYSTTGALDTI
GPDGTQVAIVQFSDDARTEFKLNSYDNKERLLEAINRISYKGGNTKTGLAIRHVKDTIFT
VGGGIRRGIPKVVVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPS
ERHVFFVDDLDAFQKIEEKLVTFVCEAATATCPSVAMSGSTLPGFRMMEMFGLVEGLYGH
VSGVSMEPGTFNSFPCFRLHNNSLLAQPTKFIHPEGLPSDYTITMLFRLLPETPKEPFAL
WEILNKDNEPLVGVILDNGGKTLTFFNHDYKGQFQTVTFEGPEIKKLFYGSFHKLHLAIS
KTNAKAVIDCKLVGEKAINAAGNITTDGLEVLGRMVRSRGKKDNSAPFQLQSFDIVCSTS
WASRDKCCELPGLRKEEDCPAMPRACTCTQDSKGPPGPTGPPGGPGIRGGRGDRGEPGAV
GPIGPVGDAGTPGLQGPPGPQGPSGRTIMGPPGGPGERGEKGAAGAPGIQGIPGSPGSPG
REGQTGTRGLPGKDGPQGRTGPPGTMGTPGAPGSPGSSGPQGSLGDQGPPGSAGNKGEKG
ERGDLQSQASVQAIARQVCEQLIQSHMARYSSILNHIPSAPVSVRTIPGPPGEPGRQGGQ
GPQGEQGPAGRPGFPGSNGENGQPGARGLSGEKGDKGSPGVGVQGPRGPVGPPGPTGQGR
TGSQGPSGRPGNPGTPGRPGIPGPVGSAGPPGYCDQNSCMGYNVGEGGNGGDPSDHRNLP
LVQLPPNVYQNYDEAGEEDPYRYDAGGYPSEYYQPNYPAPRPVEPEDPGLTQGDEVLRSP
GIHRSSRSLAEEEEEEKKKEEVGLEERKMVGPMRESRLRRALRRSGTHD
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgccagctacaggactgaagacgtgggtatggaatcctctactctgtctggctcttatc
tctctctcacctgcaccagctccagctcagggtcaagttgccactccacgaagacttcgt
ttcaaggtcctgagcgcaacccagctgcatgtgtcatggaaagagccgaaaggagacttt
gaaagctacagatttatttatagcacacaatcagatgcagaggagactgaactagacgtg
acaaagaaggaagccaaagtgatcatagactttgaccccagacagttatacacagtcaag
gtcactgctgtgaaaggtgctcaggagagcaagccacttctaggaacatttgaggcccaa
ctttcagagcctgacgttaagaacgtacagccccagaatgtacgccccaaaaaccagaaa
gacaccagtatcacagaggagaacaatgagatatctgaagagcagttcatgtgtaagacc
ccggccatagcggatattgtgatcctggtggacggatcatggagtatcggacggataaac
ttccgtctggtccgcatgttcctggagaatctggttagcgccttccatgtggagtttgac
aagacacggataggcctggcccagtatagtggtgaccccaggattgagtggcacctgaac
actttcaccaccaaagaagcagtcatcgacgctgtgaagaaccttccttacaaaggaggg
aacacactgacgggtcttgcattgacgtacatccttgagaacagttacaaacccgagtcc
ggatccagggccggcgttcccaaaattggaatcctgatcacagatgggaagtctcaagac
gatgtccaacccccagcgcggagtctgagagaggcgggaatagagctgtttgccattggt
gtgaagaacgctgatgagaaagagctgaaggccattggctctcctccagaggagacgcac
gtctacaatgtggctgacttcagcgtcatgagctccatcgtggagggtctgaccaggacc
gtctgcgaccgggtcgaacagcttgacaaagccatcaaaggcgacacaggcccagaagtc
accatggccgctcccagagacctggtgacctcggaagtgacggccaggagtttccgggtg
tcgtggacccacgcccctggcacggtggagaagtaccgggtggtgttctaccctgccagc
gggggccagcccgaggagaaggtggtgcagggcacagtggacacggtggtgctcaactac
ctcctctcgctgactgagtaccaggtggccgtgttcgccatctatgccagctcagctagc
gaagccctccgaggcagcactaccacattggccctacccatggtgaacaacctggagctg
tttgacatcacccacaatagtatgagagcccgctggagggtcgcagagggggcttctggc
tacatgatcctctatgctccactgaccgagggagacgccgccgacgagaaggaggtgaaa
gtggctgagactgtgaacgaagtggaactggagaacctgactccagacacagagtacaca
gtgaccgtgtacgccatgtacggagaggaggccagtgaccctatgaccagtcaggagacc
acgttacccctgaccccggcgcggaacctgcgcttctccgacgtcgaccacagctcggcc
aggctcacctgggaggcgacgtccaagaaggccaacggctaccgcatcatgtacgtcaag
acaaacggagtgcagaccaatgagatggatgttggccgcatcaccaccctgttgctaagg
aacctgacgtcattgacagagtatacggtggccatctttgctatctatgacgagggccag
gcagagccccttactgacagctttaccactaagacagtcccagagcctctgaacctaaag
accagtgaagtctccacagagagcttcagggtcacttgggaacactcagcccaagacgtg
gtcctctacagactcacctggaccccaaccagaggaggagacactaaagagatgctcgtg
aatggtaacaggaacagccacctgctgactggactgaggcccatcactgagtacgaagtc
tctctgattgctgtctttagaaacgaggaggaaagcgacgccgtgaccctcacagagtca
acagtggcaagaacaacgactaccacaaaagctactacaaccacaactaccacacgagct
accaccacagcagttgtgcatctgggtgcgaggaacctcctgcttagtgatcacaccacc
ttcagcatggaggtgtcctgggagctgcaggaccgcaatgtgcgtcagtaccgcgtcgcc
tatgtcaccgccaggggcgatcgtgccgaggagacgaaaatggtccccggtggtcagaac
agcctgctgctgcaaccactactgtctgacacggagtacaaggtgacggtcaccccggtc
tacaccgacggagatggccccggtgtcagccgcatgggacgcaccttgccactgtctgct
cctaggaacctgagagtgtcggaggaatggtacaaccgcttccgtatcacctgggacaca
cccccatccccaactatgggctacagggtcgtctacaaacccatctctgctccgggacct
gctctggagacctttgtgggcgaggacgtgaacaccatgctgatcctgaacctgatgagc
ggtacagagtacggcgtcagggtcatcgcctcctacaccaccggctccagcgaggccctc
actggcaaggccaggacactatacctgggagtgaccaatctgaacacctaccaggtgagg
atgaacagcatgtgtgcccagtggagttcccaccgccacgccactctgtaccgtgtggtc
atcgagtcgctgctcaatggacataaacaggaggcaaggctgggaggaggagccacccgg
cactgcttcaatgacctgacggctaacacgcagtacaaaatcagtgtgtacgcccaactc
caggacacagaggggcctgcagtcaccaccacagagagaaccttccctgttcccaccccg
gcacctaccaggccgcccactaccacccctcctcccaccataccctcaaccaaggaagtt
tgcaaggcagccaaggcagacctggcgttcctagtggatggctcctggagcatcggggat
gaaagcttcctgaaaatcatccgcttcctgtacagcaccacaggagcccttgacaccatt
ggaccagatggcactcaggtggccattgtccagtttagtgacgatgctagaaccgagttc
aaactcaactcctacgacaacaaggagaggctactagaggccattaaccgcatctcctac
aagggagggaacaccaagacagggctagccatccggcatgtgaaagacaccatcttcacg
gtggggggagggatccggaggggcatccccaaagtagtggtggtgttgactgacgggcgc
tctcaggacgatgtcaacaaggtctccaaagagatgcagatggaagggtacattgtcttt
gccattggttttgcggatgcggactacggggagctggtgagcatcgccagcaagcccagc
gagagacacgttttctttgtggacgatttagacgccttccagaaaattgaggaaaagctg
gtcacctttgtttgtgaggctgccactgccacttgtccttcggtggcgatgagtggcagt
accttgccaggtttcaggatgatggagatgtttggcctggtggagggtctgtatggacat
gtatcaggagtgtccatggagcctggcaccttcaacagcttcccctgctttcgactgcac
aacaactccctcctcgcccagcccaccaagtttatccaccctgagggcttgccctccgat
tacactatcaccatgctgttccgcctgctgccagaaacccccaaagagccctttgcattg
tgggagatcctcaacaaggacaatgagcccctggtgggcgtcatcctggacaacggtggc
aagaccctcaccttcttcaaccacgactacaaaggacagtttcagactgtgaccttcgag
ggacctgaaatcaagaagctcttctacggcagtttccacaagctgcacctggctattagc
aagaccaacgccaaggctgtcatcgactgtaagctggttggggagaaggccatcaacgcg
gcgggcaacatcaccacagatggcctggaggtgctgggacgaatggtgcgctcccggggg
aagaaggacaactctgcaccgtttcaactgcagtcgtttgacatcgtctgcagcacgtcc
tgggccagccgagacaagtgctgtgagcttcctggtctgaggaaggaggaggactgtcct
gccatgccccgggcctgcacctgcacacaggacagcaaaggcccccccggcccaactgga
ccccctggaggtcctgggatcagaggagggagaggggaccgtggagaaccaggagctgtg
gggccgataggtccagttggggacgctggcactcctgggctgcagggacctcctggcccc
cagggccccagcggccgcaccatcatgggccccccgggtggtccaggagagagaggtgag
aagggtgcagctggcgctccaggaattcagggcattcctgggtctcctgggtcaccaggt
cgagagggacaaacaggaacaaggggactgcctggtaaagatggaccccaggggcgaaca
ggtcctccagggactatgggcactccaggagctcccggctcaccagggtcaagtggacct
caagggtcactgggagaccaaggacctcctggttccgccggaaacaaaggagagaaggga
gaaagaggtgacctgcaatcccaggcatcggtccaagcaatcgcccggcaggtctgtgag
cagctgatacagagtcacatggctcgctacagctccatcctcaaccacatccccagtgca
cccgtttcggtccgcaccattcctggacccccaggagagcccgggcggcagggcggccaa
ggaccacagggagagcaggggcccgcgggcagaccagggttccccgggtccaacggagag
aatggacaaccaggagccagaggtttgtcaggagagaagggtgacaagggaagcccaggt
gtaggagtccagggtcccagaggccctgtaggacccccaggaccaacgggtcaggggcgg
acaggtagccagggtccgtctggtcggccggggaaccctggaactcctgggcggccgggt
atccctggaccagtggggtcggctggacctcctggatactgtgaccagaactcttgcatg
ggctacaacgtaggagagggtggcaacggtggtgacccatctgaccaccgcaatcttccc
ttagtccaattgccccccaacgtctaccagaactatgacgaggcgggggaggaggacccc
tataggtacgatgcggggggctacccctccgagtactatcagcccaactacccggctccc
cgaccagttgagcccgaggacccaggcctgacccagggcgatgaggtgctgaggtccccc
gggatccaccgctcctccaggagcctggctgaagaggaggaggaggaaaagaagaaagag
gaagtggggctggaggagaggaaaatggttggtcccatgagagagagcaggctaaggaga
gccttgaggaggtcggggacacacgactga
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integrated database retrieval system
