Oncorhynchus masou masou (cherry salmon): 135552274
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Entry
135552274 CDS
T10723
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135552274
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135552274
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GFIT
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NCBI-GeneID:
135552274
NCBI-ProteinID:
XP_064839868
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Position
13:complement(38601794..38618379)
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AA seq
931 aa
AA seq
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MADKRKLQGEIDRCLKKVTEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGNWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRFIEKHRYHI
RMLETILRMLDNDTLPVDSIRKIKDDVEYYMDSSQDPDFEENEFLYDDLDLEELPTSPSV
SPHPSLVSLAGSLVATSPPGQSLLDDDLFHQISSGTPTSTTSSSPIPATYTTENSEDDKK
RGRSTDSEISQSPVKNGNPSSSLSSSSSSSSSSSSSASGASSGAASSSLVSMVTIAGGGQ
ANAGGNNNSLLGNMGGLLSNSGSYSDATQQQLQQHHQTQQARNSILSSNASSSPSNNILL
PSPSASSPAISCTALTPNTQPQAPSRPSPGSTLGLGLGLGLGKGGMSGSPAVSQMSGLGL
SGMPASLNTMAGLLAGSTSAPYAMAAAGSGTIGSPLAGKISSLSTSSNNSSAVGPVSGLS
DRSTGLLGSVPGAVGVSGGILGSGQSTVQGPPLVSPSPIGGGLTPGSSLGAIGSIGGNSG
SGAPSNSLGIGGGNAAIARPPSGQKQNGSTSYSAVVADSTPDSALNIASQLQSSQPSSLI
STTNQLKDSGPSLLGSMTLPTSTPSPSYIENKPSGSSMLNGPLSYTQASESMKPQEPLST
VKSMAEQAALGSAMEGELPPLHLTTDIFPSTTAPPGPPSAPQQPSLSEVSIPPSLGVCPL
GPVPLSKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEF
YQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQG
TYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaggaaacttcaaggtgaaatagatcgatgtttgaaaaaagttacggag
ggcgtggaacagtttgaagacatttggcaaaagcttcacaatgcagccaatgctaaccag
aaggagaagtatgaagccgacctcaagaaagagattaaaaaactacagcgtcttcgagac
caaatcaagacgtgggtggcctccaacgagatcaaagacaaaaggcagctagtggagaat
cgcaaactcattgagacgcaaatggagcggttcaagatcgtggaacgagagaccaagaca
aaggcttactcgaaggaggggctgggcctggcacagaaggtggacccggcccaaagggag
aaggaggaggtcggcaattggctaacgaatacgatagacactctgaacatgcaggtggat
cagtttgagagcgaagtggagtccctctcagtccagactcgaaagaagaagggagacaaa
gagaaacaggaccgcatcgaagagctgaagcgcttcatcgagaagcaccgctaccacatc
cggatgctggagaccatcctgcgcatgctggacaacgacaccttgccggtggactccatc
cgcaagatcaaggacgacgtggagtactacatggactcgtcgcaggaccccgacttcgag
gagaacgagttcctctacgacgacctggatctggaggagctccctacctctccctctgtc
tccccccatccatctcttgtgtctctagccgggtcgctggtggccacgtccccgccgggc
caatcgctcctggacgacgatctcttccatcagatctccagcggcacgcctacctccacc
acttcctcctcgcccattcccgccacgtacactacggagaactctgaagatgacaagaaa
aggggacgttcgacagacagtgaaatcagtcagtcacctgtcaagaatggcaacccctct
tcatcgctgtcttcatcgtcctcatcctcctcgtcctcctcttcatctgcctctggcgcc
tcctcgggagcagcctcttcctcgctggtctctatggtgaccatcgccggaggcggccag
gccaacgctgggggcaacaacaacagccttctgggcaacatggggggtctcctctccaac
tctggcagctacagcgacgctacccagcagcaacttcagcagcatcaccaaacgcagcag
gccagaaactcaatcctctcctccaacgcctcctccagcccgtcgaacaacatccttctc
cccagcccctccgcctcctcgcccgccatctcttgcacagccctcacacccaacacacag
ccgcaggctccgtcaaggccctctccgggctccaccttggggctcgggttgggcttgggc
cttggtaaaggcggcatgagtgggtcaccggctgtcagccagatgtcgggccttggcctg
tcagggatgccggcgtccttaaacaccatggccggactcctggcgggctccacttcggcc
ccctacgccatggcagcagcaggctccgggaccataggaagcccccttgcagggaaaatc
agcagcctgagcactagcagcaataactccagcgcagtgggaccggtgagcggactcagt
gacaggtccacgggccttttgggctctgtgcccggtgcagttggtgtcagtggtgggatc
cttggctctggacagtcgacagtccagggccctccactggtgtcccccagtcccatagga
ggaggtctgacccctggaagcagcctaggagctataggaagcattggagggaactctgga
tcaggagcgccaagtaacagcttgggcatcggaggaggaaacgcggcgatcgcaaggcca
cccagtggacagaagcagaatggtagcactagttacagtgctgtagtagcagacagcaca
ccagattctgccctcaacattgccagccaattacaaagcagccaaccctcgtctttgatc
tccaccaccaatcagcttaaagacagtggccccagccttttagggtccatgaccctaccc
accagcactccctcgccatcctacattgagaataaaccttcaggcagcagtatgctcaac
gggccgctctcctacacacaggcctctgaaagcatgaagccccaggagcctctgagcact
gtgaagtccatggccgaacaagcggcactgggctcagcaatggagggagagttgccccct
ctgcacctcaccacagacattttccccagcactacagcgcctccagggcctccctcggcc
ccccagcagccctcgctctcggaggtcagcatccccccatcgctgggtgtgtgcccgctg
gggcccgtacccctgtccaaagaccagctgtaccagcaggccatgcaggagtcggcctgg
acgcacatgccccacccctccgactcagagcggattaggcagtacctgatgaggaacccg
tgtcccaccctgcctttccaccaccaggtgccacccccccactccgactctgtggagttc
taccagagactgtccacggagacactgttcttcatattctactacctagagggcaccaag
gcccagtatctggcagccaaggccttgaagaagcagtcgtggcggttccacaccaagtac
atgatgtggttccagaggcacgaggagcccaagaccatcacagatgagtttgagcagggg
acgtacatttacttcgactacgagaagtggggacaacggaagaaggaaggattcacgttt
gagtacaggtaccttgaagaccgagacctccagtga
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