Oncorhynchus masou masou (cherry salmon): 135552375
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Entry
135552375 CDS
T10723
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135552375 (lrp12)
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135552375 (lrp12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
135552375
NCBI-ProteinID:
XP_064840021
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Position
13:43270395..43308772
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AA seq
886 aa
AA seq
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MAYYTLSSNGISSSSWISLHMVLLIFTGIAVCSQHNENVYVSGISNACGDVAEQIRASSG
VITSPGWPFQYPSRINCSWNIRANPGEIITISFQDFEIQSSHRCGLDWISISTYKNLDGY
RACGSSIPAPYISSQDHVWIKFHSDDIMTGKGFRLSYITGKSEMISCDLDQFHCSNGKCI
PESWKCNTMDECGDNSDEELCVQPNPSAAFSFQPCAFNQFPCLSRYTRVYTCLHESLKCD
GSIDCQDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILR
FMDFKLDGTGYGDYVKVYDGLEENPRRLLRVLTAFDSRAPMAVVSSSGQLRVHFYADKIN
AARGFNVTYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEVNCSTCQEDEFPC
SRNGACYPRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGS
DEESCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAEL
LRREAPPSYGQLIAQGLIPPVEDFPVCSGNQASVLENLRLAVRSQLGFTSIHLPTSGRHS
NIWQRLFNFTRSRRSGSLALVSADGEDNSTSSGNGGCSAHEPDRAGPHRGLLPLDSDDTD
TESERRDVPGAVGGLVAPLPMKTPPATAVEAIVSVSTNSTTPAPLPSRRDSHRARASPAV
VEAHTMETPGGEAAEPQCTATGRSQLSSALSRVTRSLHWVRFSLGRSGGSSGGGTQNHSP
LRHLEHGAGTREDEDDVELLIPVSDAASDTDSTSETSRLLSLEVGLDQAAPRLSSPASLR
SGRVSLARNGPCEHCSMVHTAQIPDACLEATGKTETNSDDELLLLC
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcctactacactttgagctcaaatgggatttcatcttcatcatggatctctctacat
atggtcctcctcatattcactggaattgcagtttgctcccagcacaacgagaacgtttac
gtatcggggatttctaatgcctgtggagatgtggcagagcagatcagggcgtccagtgga
gtgatcaccagccctggctggcccttccagtacccctccaggatcaactgcagctggaac
atcagggctaaccctggggaaatcatcaccatcagtttccaggactttgagatccagagc
tcccaccgctgcggcttggactggatctccattagcacctacaagaacctggacggctac
cgggcatgtggctcatccattccagccccttacatttcctcccaggaccacgtgtggatt
aagttccactcagacgacatcatgactggcaagggcttcaggctgtcttatataacagga
aaatcggagatgatcagctgcgacttggaccagttccactgctccaacggaaagtgcatc
ccggagtcgtggaagtgcaacaccatggacgagtgtggtgacaactctgacgaggagctg
tgcgtccagcccaacccctcggcagcattctccttccagccctgtgccttcaaccagttt
ccctgcctttcccgctacacccgcgtctacacctgcctgcacgagtcgctcaaatgtgat
ggcagcatcgactgccaggaccttggtgacgagatcgactgtgacgtgcctacctgcggc
gagtggctgcggaacttctacggcaccttcagctcacccaactaccctgacttctaccca
ccaggcagcaactgcacctggcttatcgacacaggcgaccaccgcaaggtgatcctgcgt
ttcatggacttcaagctggacgggacgggctatggggactacgtcaaggtgtacgatggc
ttggaagagaaccctcgccgtctactccgcgtcctcacagccttcgactcccgtgccccc
atggccgtggtctcgtcctcgggccagctgcgcgttcacttctacgctgacaagatcaat
gcggcaaggggcttcaatgtcacctaccaggtggacggtttctgtctgccctgggagatc
ccgtgtgggggcaactggggctgctacacggagcagcagcgctgcgacggttactggcac
tgccccaatggccgcgacgaggtcaactgcagcacctgccaggaggatgagttcccctgc
tccaggaacggcgcctgctacccgcgctcggaccgctgcaactaccagaaccgctgcccc
aacggctcggacgagaagaactgcttcttctgccagcctggcaacttccactgcaagaac
aaccgctgtgtgttcgagagctgggtgtgcgacgcgcaggacgactgcggcgacgggagc
gacgaggagagttgtccggtcatcgtgcccacacgggtcatcacggcggcggttatagga
agtctcatctgtggtctgctgctggtcatcgctctgggctgcacctgcaaactctactcc
ctccggatgtttgagcgcaggtcatttgagacccagctgtccagagttgaggctgagctc
ctgaggagggaggctcctccgtcgtatggccagctgatcgcccagggccttatacccccg
gtggaggacttccctgtctgctccggcaaccaggcgtctgtgttggagaacctgaggttg
gctgttcgctcccagttgggtttcacctccatccacctgcccacctccggtcgccacagc
aacatctggcaacgcctcttcaacttcacacgctcacggcgctccggctcactggccctg
gtgtctgctgacggcgaggacaacagcaccagcagcggtaacggtggctgctcggcccac
gaacccgacagggctggaccccaccgtgggttgctgcccctcgactcggacgacacagat
acagagagcgagcgccgggatgtccctggggccgtgggggggcttgtagcccccctcccc
atgaagacccctccggcaactgcagtggaggccatcgtctcggtgtcgacaaactccacc
actcccgcccctctgcccagccgtagggacagccaccgggctagggccagcccggcagtg
gtggaggcacacaccatggagaccccagggggagaggcagcagagcctcagtgtaccgcg
accgggaggagccagctgagcagtgccctgagccgggtcacccgcagcctgcactgggta
cgtttctccctgggccgctccggaggctcctcgggtgggggaacccagaaccacagccct
ctgaggcacctagagcatggagcagggaccagggaggacgaagacgacgtggagctgctt
atccctgtatcggatgctgcctcggacactgactccaccagcgagacctccaggctcctc
agcttggaggtaggtctagatcaggctgccccccgcctatcatccccagcctctctcagg
tcaggccgggtgtccctggcccggaacgggccctgtgaacactgtagcatggttcacacc
gcacagatcccagacgcctgtctggaggccacaggcaagacggagaccaatagtgatgac
gagttacttctgctctgctaa
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