Oncorhynchus masou masou (cherry salmon): 135552423
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Entry
135552423 CDS
T10723
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135552423
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135552423
Membrane trafficking [BR:
omm04131
]
Protein recycling
Others
Others
135552423
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
135552423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
Beta-prop_CATSPERE
DarA_N
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
135552423
NCBI-ProteinID:
XP_064840091
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Position
13:complement(45754905..45801236)
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AA seq
564 aa
AA seq
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MADVEGDEIRSALLSASSNGPAAGSVVGTGGQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRTGERELVLSVLSVPPQEADCLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYIFPKIPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDKPLAVHYCFHQALDDVKKGFIKTEDKSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCSCDSRRKGHVITAISMHHFKLHACTEDGTLENQVISFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEKEASDKDNQNCS
NNEYLPALETQKRWRHLGGEIATS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattcggtcggctctcctttcggcttccagtaatgga
cccgctgcaggttcggtagtcggtaccggaggccaaaatgctacccaggtgacgtcaggt
ccacggatggttagaattgtaaagtcagaatctggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcattaatggggaattgtacgcccctcttcagcat
gtcagtgctgttttgcctggaggggctgcggaccgagctggcatatcaaagggtgatagg
attcttgaggttaatggagtgagcgtggagggggccacccacaagcaggtggtggatctg
atccggaccggagagagggagctggtgctgtccgtactgtctgtgcctccccaggaggcc
gactgcctggaggccggggatgagagcgcggcccagctcagctacgactacagcgacaag
caggccgtacccatctccatccccaccttcaagcacgtggagcagcacgctgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgttaccgagagttt
gctatcctgaaccagaacctgaagagggagtttgccagctacatcttccccaagataccc
gggaagtggcccttctctctgtctgaacagcagctggacgcacgccgcaggggcctggag
gagtatctggaaagagtttgttctgtgcgggtgattggggagagtgacatcatgcaggaa
ttcctgtctgaatcagatgagaattacaatggtgtgtcagacgtggagttgcggatagcc
ctgccagacaagaccaccatctcggtcagggtgcgcaagaatagcacgactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgagaaaactggcccccaacgagttcccccacaag
ttgtacgtacagaactacacatcggccgtgccgggtacctgtctggccctccgcaagtgg
ctcttcacttctcaggaggaggagctgctcagggacaaacctctggccgttcactactgc
ttccaccaggcattggatgatgtgaagaagggattcatcaaaacagaagacaagtcttac
cagctgacaaaactcgcagagcagcgcaagatggccatgtatctgagtctgctgcgctcc
tgtgagggatacaatgaggtcatgttcccccactgctcctgtgactcccggaggaagggc
cacgtcatcacggccataagcatgcaccacttcaagctgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatatcgtttgagtgggcggagatgcagcgctgggacaccgat
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtg
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacaggttgaaaaagaggcctctgacaaagacaaccagaactgcagt
aacaatgaatatctccctgctctggagacacagaagagatggcgccatctagggggcgag
attgccacatcctaa
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