Oncorhynchus masou masou (cherry salmon): 135552625
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Entry
135552625 CDS
T10723
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135552625
04121 Ubiquitin system [BR:
omm04121
]
135552625
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
135552625
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Atypical E3
135552625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
135552625
NCBI-ProteinID:
XP_064840419
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All DBs
Position
13:complement(56114213..56117158)
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AA seq
624 aa
AA seq
DB search
MSSPQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGTDRIEFLIETARQLKIT
HVMQDDRSPCPQPTKHGPGGRDGPMEGGRPLPERFERGRGDYGAPARIPNGLHRIDDGGP
QQELSGQSPNNARRPMGGTVPPNLMTQGLVGAPHGLLAAVPGLNARVGGAPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLALDFELKIFAEYPCGSGNMFSSLAVLVKQM
FHDSQRDSGSKMVNSGLKYVEYEKRHGAGDWRLLSELLSDAVRAFKDTPGPDVLPQPYLD
ASCSMLPTALCHMSRSAPPVRGRRRKASPEPQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSFPSVSQPPPHQEGSASHSHSSNSSPITALMSVAESPREAPSSSSSSGGGLGHSSLAV
RQSSSSPMAACPAGQQRRLASRNGEPQGASNSAGGTTAALPLAGASDQGAGDPSGSSGPP
LCCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSQGPGSEVFCPSGERCPLVGSNVP
WAFMQGEIATILAGDVKVKKERDP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccccagtcatattcaaggcggcagtggtgttgttacctttgcgatttgcct
aagatgccttgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggtacggaccgtattgaatttctcatagagacggcaaggcagttgaaaataact
catgttatgcaggatgacaggtccccgtgtccccaacccactaaacatggcccaggtggg
agagatggacctatggagggtggcaggccacttcctgaacgctttgaaaggggaagaggg
gactacggagccccagcacggatccccaacggtctgcacagaatagatgacgggggccca
caacaagaactcagtggccagagccctaacaacgccagaagacccatggggggtactgtt
ccgcccaatttaatgacacaaggccttgtgggggctccacacgggttgctagcagctgtg
cctggtttaaatgccagagttgggggagcccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaatgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
ggacggatctttgccttcgacgccaagctggcgctggactttgagctgaagatctttgcg
gagtacccgtgcggctcggggaacatgttctccagtctggcggtgctggtcaagcagatg
ttccacgacagccagagagactcagggagcaagatggtcaactctggcctaaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctgctgagtgac
gcggtaagggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
gccagctgctccatgctgcccacagcgctgtgtcacatgtcccgctcggcaccgccagtc
cgcgggcgccggaggaaggcttccccagagccccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggaatggctatccacctagct
gcctcctccttccccagcgttagccagccacctccccaccaggagggctcggcctcccat
tcccacagcagcaactcctcccccatcacagcactgatgagcgtggctgagtcacccaga
gaggcccctagcagcagcagcagtagtggtggaggcctgggccactcctccttggcagtg
aggcagagcagcagcagccccatggcggcctgccctgcggggcagcagcggcgcctggcc
tccaggaatggggaacctcagggagccagcaactctgcagggggaaccacagcagctctc
cccctggctggggcctcggaccagggagcaggggacccctccggctcctctggtccccct
ctctgctgcaccatctgccacgagcgcttggaagacactcactttgtccagtgcccctcg
gttgcggcccataagttctgcttcccttgcaccagagacttcatccggagccaggggccc
ggcagcgaggtgttctgccccagtggagagcggtgtcccctggtgggctccaacgtgccc
tgggccttcatgcagggagagatcgctaccatcctggctggagatgtcaaggtgaagaag
gagcgcgacccctaa
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