Oncorhynchus masou masou (cherry salmon): 135552740
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Entry
135552740 CDS
T10723
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
omm03420
Nucleotide excision repair
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135552740 (ercc2)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135552740 (ercc2)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135552740 (ercc2)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135552740 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135552740
NCBI-ProteinID:
XP_064840623
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All DBs
Position
13:60369652..60377529
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AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
REYPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKETGEKNNILALALSSRKNLCVHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHSNPSLPSCRFYEEFDAMGKQVPLPAGVYNLDDL
KEFGRRKGWCPYYLARYSILHANIIVYSYHYLLDPKIADLVSKELSKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRSQANVETLQNTILKIKETDAAKLKEEYRRLVEGLKEANVARE
TDIYMSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD
IFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSAITLISNFATLVSTYSKGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDIYPRILDFRPVTVAS
FTMTLARTCLCPLVVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYTYMENIVASWYEQGILENVQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLQSEDMLQKIAQIAHQA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgaagggttgttagtctatttcccatatgactacatttacccagag
caatattcctacatgctggaactcaagaggaccctggatgccaagggacatggagttctg
gagatgccatcgggaactgggaaaaccatctctcttctgtcattgattgttgcatatcag
cgggagtatccccttgaagtcacaaagctgatctactgttcccgaactgttcctgagata
gagaaggtggtggaggagttgaggaagttaatggagttctattctaaggagacgggagag
aagaacaacatcctggctctggcgctctcctctcggaaaaacctgtgtgttcaccccgag
gtgagctcattacgctttgggaaggaggtggatgggaaatgtcacagcctgacggcgtca
tacatccgtgcccaacggcacagcaacccaagcctgccttcctgccgtttctatgaggag
tttgatgctatgggaaagcaggtgcctctccccgctggagtctacaatctggacgatctg
aaggagtttgggcggaggaaaggctggtgcccctactacctagcacgctattcgatcctc
catgccaacatcatagtttacagttaccactacctcctggacccaaagattgcagacctt
gtctcaaaggagctctccaagaaatcagtggttgtttttgacgaagcacataacatcgac
aatgtgtgcatcgactcaatgagcgtcaacatcaccaggaggactctggaccgcagtcag
gccaacgtggagacactacagaacaccattctcaagataaaggagacagatgcagccaaa
ctgaaagaggaatacagacgattggtggagggcctgaaagaggccaacgttgctagggag
accgacatctacatgtccaatcccgtgttgccagatgagatcctccaagaggctgtgcct
ggcagcatccgcacggcagagcactttgtgggcttcatgaagcgtttcctggagtacctg
aaggccaggctgaggattcaccatgtggtgcaggagagcgctccacagttcctcaaagac
atctttgagaaggtctgcattgaccgcaagcccctcagattctgtgccgagaggttgcgt
tcgttgctgaggactttagagatagcggacatcgcagacttctcagccatcaccctcatc
tccaactttgccactctggtcagcacttacagcaaaggcttcaccatcatcattgaaccc
tttgaagacagaacccccaccattgctaaccccgtgctgcacttcagctgtatggaccct
tccattgccatcaagcctgtgtttgagcgcttccagtctgtcatcattacgtcagggacc
ctttcaccgttggacatttacccccgaatcctggacttccggcctgttaccgtggcatcc
ttcaccatgacgctggcacgcacctgcctctgccctcttgtggtggggagggggaacgac
caggtggccatgacctccaagtttgagacgcgtgaagattttgctgtcatccgtaactat
ggcaacctgctgctggagatgtctgcgattgtgccagatggcatcgtggccttctttacc
agctacacctacatggagaacattgtggcgtcgtggtatgagcagggcatcttggagaat
gtccagagaaacaagctgatcttcatcgagaccccagacgcagcagagaccagcatggct
ctggagaaataccaggaggcctgtgagaacggcagaggagccatcctgctctctgtggcc
agggggaaggtgtccgagggtatcgactttgtccaccattttggccgtgcggtgatcatg
ttcggagtgccttacgtttacacacagagccggatcctgaaggcccgtctggagtacctg
cgggaccagttccagattagagagaatgacttcctgacgtttgacgccatgcggcacgca
gcgcagtgtgtgggccgcgccatcaggggcaaaactgactacggcttgatgatcttcgca
gacaagcgctatgcccgggctgacaagcgagggaagctgccccggtggattcaggagcac
ctcactgacggcagcctcaacctgaccatcgacgagacggtacagctgtccaaacacttc
ctacgccagatggcccagcccttcagacaggaggaccagttgggcctgtctctgctgaca
ctggagcagctgcagtcagaggacatgctgcaaaagatcgcccagatcgctcaccaggcc
taa
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