Oncorhynchus masou masou (cherry salmon): 135552846
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Entry
135552846 CDS
T10723
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03440
Homologous recombination
omm03460
Fanconi anemia pathway
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135552846
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
135552846
FA (Fanconi anemia) pathway
Downstream FA components
135552846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135552846
NCBI-ProteinID:
XP_064840821
LinkDB
All DBs
Position
13:65425942..65473616
Genome browser
AA seq
1571 aa
AA seq
DB search
MAAPPVEYTIGGVKIQFPCKAYPSQLAMMNSIVRGLNHGQHCLLESPTGSGKSLALLCSA
LAWQQAQYGKLEQDGSSPTEGKKPAVTTPCQCACHSKRASVPDNRPKALATVVVDLTGSP
EVVMAQSSSSPTDPVPPPPEEYKPKSLASRLSDKLQTSLTSEDDDFQPDRKRIRTPAMEQ
KGRKRRCLEPGVVFIDDEPEGERPVPGAQTWTVELSTQAQTIDLPLDRNCCSPMVSCSLC
PCASSKGGQNGAAGKSSKEKDKEGKKKQVPKIFFGTRTHKQITQVAHEMKRTLYTSAPMT
ILSSRDHTCVHPEVVPHSNRNERCKELLEAKNGVSCRFKNGVHKMQDQNTLQWVHGLHQA
WDIEDLVRLGGRLRACSYYAARDLMQEACIIFCPYNYLLDPLIRESMQINLKGQIVVLDE
AHNIEDCARESASYTLNKPQLLSAREELDGMVTHNIRRSNHEPLRAFCCSLLNWMQESCS
VLAEREYEMSCKVWNGKEVLGLFHAMGITADTFAMLQKHLAAVLEKEERVGLVNGREDTV
EVPTISSASSSVLKSLFMVLDFLYRDKSRFAEDYRVALQQSYAWTTAPDVPDAQGFFARP
NRRRHSAKTKTLVHTLSFWCLNPAVAFSDLSDSVHSIVLTSGTLSPMGSFSSELGVKFSI
QLEASHVISKSQVWVGTLGSGPQGRKLCATFQHAETYAFQDEVGALLLRVCQAVGRGVLC
FLPSYKMLDKLRDRWTNTGLWEKLEERKTVITEPRGGGKGDFDELLQVYYDAIRISGEFA
GDRDGALLMAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKARG
LLSGSRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFGNNPNKYISGLSKWVRNLVR
HHDTFRGAMQSLVAFSQCQQGAGEIHGAGSQTFNSTTVLSPASQSSVTVEDLSHCRPSPS
PSSDCLLWATVHHTTTSQVPEPHTQLQGFRSWVPPLVSVPPALCSLPTTSTGKSGNIGDQ
KQTQQHPSTHLNSDPKAPPPNISTPLSTPRSVHHLFTSTLVSSTHFKAPIFQAQDPSRHQ
DHLDDTPRPDSVEEEKKIQENVSQDPWIPFPGGMASEGLDGPASTPHSPDQDQGPVLVLS
PVEVPASCEPRQTTVVVDDPTLLEEEEDQSIFFTPEMFDDEEEVVDTKPLPRTVQGMMTG
EVTVLASSLALSTGTAQALSEDLFGPEQSPREDTETVTTTDTKRGGALAPSASRDCVSVG
WEQDRQQGSRIGSGDEAQQTQRQEDQGQGEGQELNQGVTQDQSRQTGSRTHRLSRSKQKA
PEPSSGRCTEVLVARPTQPWKGRVVLSKTQAKNQAPTHVRCSQRGSGRTKAGVPFAPTSS
LPVQPQTKDQSLEVQGRTARVRSASVAGPEETEGEQAVTGLKDQASTKPGTSIRAKTRGP
EDSFKSGTSRTARGQEDVPKPETNSSKAKGQEVTSVFCQQYSSRGRLKTTCRTEVKRFRG
KEARLPPSWEGLEEVTSSTPATTTVHLDIVNPKCEGRVCVPGSLGGEPETESSSTGLAKE
GPGSQNSLQKG
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccccagtggagtacaccataggaggggtgaagatacagttcccttgcaaa
gcctacccctcgcagctggccatgatgaactctatagtgcgagggctgaatcatggacag
cactgtctattggagagccctacagggagtggcaagagcctagccctgctctgctctgcc
ctggcctggcagcaggcacaatatggtaagcttgaacaggacggcagcagtcctacagag
ggtaagaagccagcggtcaccaccccctgtcagtgtgcctgtcatagcaaacgcgccagt
gtcccagacaacaggcccaaagcactagccactgtggtggtggacctcacaggctcaccg
gaggtagtgatggcacagagctcatcttctcccacagacccagtaccccctccaccagag
gagtacaagcccaagtctctagcctctcgtctgtctgacaagctccagacctccctcacc
tccgaggatgatgacttccagcctgataggaaacgcattcgcacccctgccatggagcag
aagggtcgtaagaggaggtgcttggagccgggagtggtgtttatagatgatgagccagaa
ggagagcggccagtgcctggagcacagacctggacggtggagctgagtacccaggcacag
actatagacctgccacttgatagaaactgctgttcccccatggtgtcctgctctctctgc
ccctgtgcctcatccaaaggcggtcagaatggagccgcggggaagtcttcaaaggagaag
gacaaagagggcaagaagaaacaagtccccaagatcttctttggcacgcgcacccacaaa
cagatcactcaggtcgcccacgagatgaagcgtaccctctacacttccgcccccatgacc
attctgtccagtagggaccacacgtgtgttcacccagaggtggtgcctcattccaaccgc
aacgaacgctgcaaggaactgctggaagccaagaatggcgtgtcgtgccgcttcaaaaac
ggcgtgcacaagatgcaggaccagaacactttgcagtgggtccatggtctccaccaggcc
tgggacatagaggacctggttcggctggggggccggctgagggcctgctcctactacgct
gccagggacctcatgcaggaagcctgtatcatcttctgtccctacaactacctactggat
cccctcatcagggagagcatgcagatcaacctgaagggtcagattgtggttctggatgag
gcccacaacatagaggactgtgccagggagagtgccagctacaccctgaacaaaccccag
ctgctctctgccagggaggagctggacggcatggtgacccataacatcagacgctccaac
cacgaacccctacgtgccttctgctgctccctgctcaactggatgcaggagagttgcagt
gttctagctgaaagggagtatgagatgtcttgtaaggtgtggaacggcaaggaggttctg
ggactcttccacgccatgggcatcactgctgacacttttgccatgctgcagaaacacctg
gcagcggtgttggagaaggaggagcgagttgggctggtgaacgggagagaggacaccgtg
gaggtccccaccatcagctcagccagctcctctgtcctcaagagtctcttcatggtgctg
gacttcctctacagggacaagagcaggtttgcagaggactaccgcgtggcgctgcagcag
tcctacgcctggaccactgctccagacgtgccagatgctcagggcttcttcgccaggccc
aaccgccgacgccacagtgccaagaccaagaccctcgtacacacactcagcttctggtgc
ctcaaccctgcggtggcgttctcagacctttcggacagtgttcacagcatcgtgttgacc
tcaggcacattgtctcctatgggatccttctcctcagaactgggggtcaagttctctatc
cagctagaggccagccacgtcatcagcaagtcacaggtgtgggtgggtacactgggctct
ggcccccaggggaggaagctgtgtgccaccttccagcatgctgagacctatgccttccag
gatgaggtgggagccctgctgctccgggtctgccaggccgttggaaggggagtgctctgc
tttttgccctcctacaagatgctggacaagctgcgtgaccgctggaccaacacagggctg
tgggagaagctagaggagaggaagactgtgatcacagagcccagaggaggagggaaggga
gactttgatgagctgctgcaggtgtactatgatgccatcagaatcagtggagagtttgca
ggggacagagatggagctctgctgatggcagtatgtagagggaaggtgagtgaaggactg
gacttcacagacgacaacgccagagcagtggtcaccatcggcatccccttccccaacatc
aaggacctgcaggtggagctgaagatgaagtataatgaccagcactgtaaagccaggggt
ctgctgtcaggctcccgctggtatgagatccaggcctacagagccctcaaccaggccctg
ggcaggtgtatcagacacaagaatgactggggagccctcattctggtagacgacaggttt
gggaacaaccccaacaaatacatctcaggtctgtccaagtgggtgcgtaacctggtcagg
caccacgacaccttcagaggtgccatgcagtcgctggtggccttctcccagtgccaacag
ggggcaggagagatccatggagcagggagccagaccttcaacagcaccaccgtcctgtct
ccagccagtcaatcttcagtgactgtggaagatctgtcccactgtcggcccagtcctagc
cccagctcagactgccttctctgggccacggtgcaccacactaccacgtctcaggtccca
gagccccacacccagctacaggggttcaggtcctgggttccccctttggtctctgtccca
cctgctctgtgttctctccccaccaccagcactggaaagagtggaaacataggtgaccag
aagcagacacagcaacacccctccactcatctgaacagtgatcccaaggccccgcccccg
aacatctccactcccctctccaccccacggtccgtgcaccacctcttcacctcaaccctt
gtgagctccacccacttcaaggctccaatcttccaggcccaggacccaagcaggcatcaa
gatcatctggatgacacgccacggcctgactctgtggaggaggagaagaagatccaggag
aatgtgagtcaggatccctggatccccttcccaggagggatggccagtgaggggctggat
ggaccggcatctacccctcacagcccggaccaggaccagggtccggttctagtcctctcc
ccagtggaggtccctgccagttgtgagcccagacagaccactgtagttgttgacgatccc
accctgctagaggaagaggaagaccagagcatcttcttcacacctgagatgtttgatgac
gaagaggaggtggtggacaccaagcctctccccaggacagtgcaggggatgatgacagga
gaggtaactgtgcttgcgtccagccttgctctctctaccggaacagcccaggctctgtct
gaggacctgtttggcccagagcagagtcccagggaggacacagagacagtcactaccact
gataccaagaggggaggcgctctcgctccctcagccagtagagactgtgtcagtgtggga
tgggaacaggacaggcagcaggggagtaggatagggagtggtgatgaggcccaacagacc
cagagacaggaggaccaaggtcagggagaaggacaggagctaaaccagggggtgacccaa
gaccagagcaggcagacaggcagcaggacacacagactgtccaggtccaaacagaaagct
ccagagccatcctcaggtcgctgcactgaggtccttgttgcaagaccgacccagccatgg
aaagggagagttgttctttccaagactcaggctaagaaccaggccccgactcatgtcagg
tgcagtcagaggggcagtggcaggaccaaggcaggggtgccctttgcacccacctccagt
ctcccagtccagccacagaccaaagaccagagcctagaggttcagggcaggacagccaga
gtcagatctgctagtgtcgctggtcctgaagagactgagggagagcaggctgtcacagga
ttgaaggaccaggcctctaccaagcctgggactagtattagggccaagaccagggggcca
gaggactctttcaagtcaggaaccagcaggacggcaagggggcaggaggatgttcccaag
ccagagaccaacagcagtaaggccaaggggcaggaggttactagtgttttctgccaacag
tacagcagcagggggagattgaagacaacatgcagaacagaggtgaagagattcaggggg
aaagaggcacggttgcccccctcttgggagggcctggaagaagtcacgagcagcaccccc
gccaccacaacagtgcacttggacattgtcaaccctaaatgcgagggtagagtgtgtgtc
ccaggaagtcttggaggtgaacctgagactgagagtagctccactggtctagcaaaggaa
gggcctggtagtcagaactctttacagaaaggttag
DBGET
integrated database retrieval system
