Oncorhynchus masou masou (cherry salmon): 135552943
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Entry
135552943 CDS
T10723
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030
DNA replication
omm03420
Nucleotide excision repair
omm03430
Mismatch repair
omm03440
Homologous recombination
omm03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135552943
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
135552943
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
135552943
MMR (mismatch excision repair)
135552943
DSBR (double strand breaks repair)
HR (homologous recombination)
135552943
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135552943
NCBI-ProteinID:
XP_064840971
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Position
13:69039542..69083231
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AA seq
605 aa
AA seq
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MLTKGAIEALTKCSNDLQNPILQLVNIRKIDGGSGPARFRLMMSDGQHSMSSFMLSTQLN
PMAEDNRLAPNCICQLKRSVTNILKDGRRVVVILDMEVVKSADEVAGKIGEPQPYVEGQS
KTPQSAPNPSVHPLQPQNGIDGSMNKGPSRAFGGNKGMPPSAMPSTPGGSSKVVPIASLN
PYQSKWTIRARVTNKSGIRTWSNSRGDGKLFSMEIVDESGEIRVTAFTQEVDKFYSIIET
GKVFYISKGSLKIANKQYSSLKNDYEMTLNGESTIIPCEDTQDVPMVQCNFVSIADLQAR
EKDTILDVIGVCKSVSDVTRLNTKNNREVSKRTLNLMDQSGKLVEVTLWGEEAETFDGSG
QPILAIKGAKLSDYGGRSLSASFSSTVMVNPDIPEAYKLRGWYDKEGHSMAGQSLTEART
GGGGGGNTNWKTLADIKTEHLGHGDKADYFSCIATIVYIRKENCLYQACPSQDCNKKVVD
QQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKD
SNEAAFEEIFQQANFHTFVFRNRVKLETYNDESRIKATVMEVKPVDHKEYSRRLIMNIRK
MAATQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaagggagcgatagaggccctaaccaaatgctctaatgatttacaaaacccc
atacttcaattagtgaacatccgtaaaattgatggaggcagtggaccagcccgctttcgt
ctgatgatgagtgatggacagcactcaatgtcttcgttcatgctctccacccagctcaac
ccaatggccgaggacaaccgactagccccaaactgtatctgtcagctgaagaggagcgtg
accaatatcttaaaggatggacggcgtgtggtggtcatactggacatggaggtggtgaag
tctgctgatgaggtggctgggaagatcggagagccccagccttacgtggaaggtcagagt
aaaaccccacagtcagcccccaatccctcagtccaccccctgcaaccccagaatggaatt
gatggctccatgaacaaaggtcccagcagagcgtttggggggaataagggcatgcctccg
tctgccatgcccagcactcctgggggatcctccaaagttgtgcccatcgccagcctcaac
ccctaccagtcaaagtggaccatccgagcccgtgtcaccaacaagagtggcatccgcacc
tggagcaactctcgtggggacggcaagctgttctctatggagattgtggatgagagtgga
gagatcagagtgactgcctttacccaggaggtggacaaattctacagcatcatcgagact
ggcaaggtgttctacatctccaagggatccctgaagatcgccaacaagcagtactcatcc
ctgaagaatgactatgagatgaccctgaatggagagtccaccatcattccctgtgaagac
acccaggacgtacccatggtgcagtgcaacttcgtctccatcgccgacctgcaggcccga
gaaaaggacaccattttggatgtgattggagtgtgcaagagcgtgtctgacgtgacccgc
ctcaacaccaagaacaaccgtgaggtctccaagaggacgctcaacctgatggaccagtct
ggtaaactggtggaggtcaccctgtggggagaggaggcagagacctttgatggctctggg
cagcccatcctggccatcaaaggggccaagctgtcggactatgggggcagatctctatct
gcttcgttcagcagcaccgtcatggtcaaccccgacatccctgaggcatacaagctgcgg
ggctggtatgacaaggagggccactctatggctggccagtctctgacggaggcgaggaca
ggtggaggaggaggagggaacaccaactggaagaccctggctgacatcaagacggagcac
cttggacacggagacaaggcagactacttcagctgcatcgccaccatagtgtacatccgt
aaggagaactgtctgtaccaggcgtgccctagtcaggactgcaataagaaggtggtggac
cagcagaacggcatgttccgctgtgagaagtgtgacaaagagttccccaacttcaagtac
cgactcatcctctctgccaacatagcagactacggggacaaccagtgggtgacctgcttt
caggagagtgctgaagccattttgggacagaacgctgcttacctagggcagctcaaggac
tcgaatgaagctgccttcgaggagatctttcagcaggccaacttccacacgttcgttttc
cgtaacagagtcaagctggagacctacaatgacgagtcccggatcaaggccacggtgatg
gaggtgaaacctgtggaccacaaggagtacagcaggagactcatcatgaacatcaggaag
atggctgccacccaataa
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