Oncorhynchus masou masou (cherry salmon): 135553190
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Entry
135553190 CDS
T10723
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135553190 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135553190 (dhx36)
03012 Translation factors [BR:
omm03012
]
135553190 (dhx36)
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135553190 (dhx36)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135553190 (dhx36)
Translation factors [BR:
omm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135553190 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ATPase
AAA_16
NPHP3_N
DUF7428
Motif
Other DBs
NCBI-GeneID:
135553190
NCBI-ProteinID:
XP_064841431
LinkDB
All DBs
Position
13:89311592..89382653
Genome browser
AA seq
1075 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRLAGSSGGGHPRSTEAESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPAREAHPSTSEHWRSTPSAPDRGGHCYFDGDEPSQDVLKIDLKQEKKEDEERPVQNTP
LTSQRYFPQDVLKAEPQEEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKKADS
KYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGS
VCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGII
LQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFS
KYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQKKEQRPRWKRGFMQGQNSRPEKDQK
EAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAILVF
LPGWDNISGLNDLLMAQQMFKSDGFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIA
ETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCYHL
YNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAITHL
MDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIP
MGKEKMADFRRRTLSRDSKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQML
HNMKGQFAEHLLGAGFTSSKNPKDPESNINSDNEKLIKAVIVAGLYPKVAMIKPSGSKKR
PVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGG
DVTIQMDTHTIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSPAPVDWSNRQSKDC
AVITAIIDLITTQERPNVNARNTEPRGRRQYYNNDDGDEYENCCISSQPREKLRP
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggccgacgaggtggccgaagaggaggtcga
ggattcggacgggatgggagccgggagaggtgggaccgcctagctgggtcgagtggtggt
ggacacccgcggagcaccgaagcggagtcgagggaggaccggggagaacgaggagggaga
ggtgggggaccaaaccgcccacccccgcatctaaagggccgggagatcgggctgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggcagtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccagccagggaggcccacccctccacatctgagcactggcgttcaaccccgtca
gcaccggacagaggcggccactgttactttgatggtgatgagccctctcaggatgtcctg
aaaattgatctcaaacaagagaagaaggaggatgaggagaggccagtacagaacactcca
ctcacatcacaacgttacttcccacaggatgtccttaaagctgaaccccaagaagagagg
gaggagaaggagaggagagggaaggataaagacctggagtacttgtttcaggaggtggtc
agggagaatgccctggaccagcagttaaagagagatctagagaggaagaaggcggactct
aaatacctagacatgctgaaattcagggaaaagcttccatcctttggaaaaaaagaggag
ttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagacggggtgtggt
aagaccacccaggtgacccagtttatcctggatgactacatagagaggggcatgggttca
gtctgcagggtggtctgcacccagccacgtcgcatcagtgccatatctgtagcagagcgg
gtggctgcggagagggctgagagtgtaggggacgggaactcatgtggttatcagatccgc
ctacagagtcggttaccacggaaacagggctcggtgctgtattgtacaacgggtattatt
ctacagtggctccgctcctcccctctgttgtccaccatcagccacctggttttggatgaa
attcatgagaggaaccttcactctgatgttctactcatcattgttaaagacctgctccga
gtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgagaagttctcc
aaatattttaataactgtcctatgatccacatcccggggatgaccttcccagtgcaagag
ttcctactggaggatgtgttggagatgattaggtaccgtccccagaagaaggagcagagg
cccaggtggaagagaggtttcatgcagggtcagaactccagaccagagaaggaccagaaa
gaggccgagtacaaggagagctggccctgctacgcccgcacactacgagacaagtactct
gacagaaccatagatgtgttggagatgatggacgatgatgataagattgaccttgagctc
atcgtgcagctgatcaggcatatcgtgctgagccaggaagaaggagccatcttggtgttc
ctgccaggttgggacaacatcagtggcctcaatgacctcctcatggctcagcagatgttc
aaatcagatgggtttgtgatcattcctctgcactccctgatgcctactgtcacccagacc
tcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccaccaatatcgct
gagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaagattaaggag
actcacttcgacactcagaacaacatcagcactatgactgcagagtgggtcagcctggcc
aatgccaaacagagaagaggacgcgctggcagggtgtgtccagggaagtgttaccacctg
tataatggcctgagggccagtcttctggatgcctaccagctacctgagatcatgcgcaca
ccactggaggaactgtgtctacagatcaagatcctcaagctgggtccaatagcagagttc
ctgaggaaagctctggaccctcccacagaggaggctgtcactctggccatcacacacctg
atggacctcaatgctctggaccgctcagaggctctgaccccgttagggttccacctggcc
aggctgcctgtagagcctcacatcgggaagctgatcctgtttggagctctgctgggctgt
ttggaccctgtcctcactatcgctgcctctctcagcttcaaggaccccttcttcatacca
atgggtaaggagaagatggcagactttaggagaagaactctgtccagagactcaaagagt
gaccacctcaccatcatctatgcctttacaggctgggaggaagcgaagcgacgcggctac
aagtttgaacgagagttctgctgggacaacttcctgtcagccaatacactccagatgctg
cacaacatgaagggtcagtttgctgagcacctgctgggggctggcttcaccagcagcaag
aacccaaaagaccctgaatctaacattaactcagataatgagaagctgatcaaggcagtg
atagtggcaggtctctaccccaaagtggccatgatcaaacccagcggcagtaagaagaga
ccggtgagagtgtataccaaaaccgatgggaaggtgtgtattcaccccaagtcagtgaat
gctgaggagacccagtttaactacacatggctcatctatcacctcaagatgaggaccagc
agtatcttcctgtacgactgtacggaggtgtctccgttctccctgctgttctttggaggt
gacgtcaccatacagatggacacacacaccatcgctgtggacgactggatcgtcttccag
tcccccgcacgcatcgctcacctcgtcaagaatctgaagaaggagctggactctctattg
gaagagaagatccgaagccccgcccctgtggactggagcaaccgccaatccaaagactgt
gccgtcatcacagccatcatagacctcatcaccacccaggagaggcccaacgttaacgcg
aggaacactgagcctagaggacgccgccagtattacaacaacgatgatggtgacgagtac
gagaactgctgcatctcttctcaacccagagaaaagctcaggccatag
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