Oncorhynchus masou masou (cherry salmon): 135553261
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Entry
135553261 CDS
T10723
Name
(RefSeq) contactin-5-like
KO
K06761
contactin 3/4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135553261
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
135553261
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Contactins
135553261
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
Others
135553261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
C2-set
fn3_4
IMPa_N_2
YejG
Motif
Other DBs
NCBI-GeneID:
135553261
NCBI-ProteinID:
XP_064841508
LinkDB
All DBs
Position
13:complement(97628398..98075671)
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AA seq
982 aa
AA seq
DB search
MMSCEARGNPVPVYSWFINGTVVEAENRYSLIDGNLIITNASETADYGRYQCKAENSYGT
VLSRDALLQFAYLGSFSGRTRGGVSVREGQGVVLMCTPPPHSPEIMYSWVFNEFPSFVAE
DSRRFISQVTGNLYVSKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGLMGEYEPK
IEVHFPLSVPAARGVTVRLECFALGNPVPTITWRKMNGNIPKKARLRKSQAVLEIPNVQL
EDSGTYECKAENPRGGTAFKGHIQVYTFPQWISTINDSQLDSGDQLHWECKATGKPRPTY
RWLRNGEPLTPQSRVEMVNGELIIQKVQQADSGMYQCVAENKYGAIYCSAELKILASPPV
FSPNPVRLIATLGKDMLLGCRPRASPKPRVTWRRGDRRIQPSRRIMLLRNNTLRIINSTR
SDEGNYVCRAENQFGSAEMTAMLWVKEAMRVDLSPSRVEVTVGESVVLSCRVSHDPSLDV
AFQWLLNQQPLNFQQEGRHFEYTQTQSSTVDLMIRSILLKHAGKYGCRAQTSADTVFAEA
EVLVRGPPGPPGVVIVEEIKDTTATLSWSGGVDNHSPISSYNLQARSPFSLGWQTLRTDP
EPVTGDMESAMAVDLNPWVDYEFRVVASNAIGTGDPSAPSRGVRTKEAVPSVVPANVSGG
NGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTMYKYRDETFPP
LTPFEVKVGVYNNKGDGPFSGVVTVYSAEGEPREAPSEVKASSISSSEIKVTWRPPNPGP
GRPRGYEVSFRKDSDQEESGNRKKTAGNETSMLLTGLEGNSVYLITVRGFNSIGQGPAST
TSTAKTKKDPPVQPPANLVWIQEGTNVSLNWDPVKSKDNESDVIGYKVLLSQEGRVHNQV
MRTITPSAVLSLPEGGTYIIEVRALSEGGEGAISSQVRVLTSSGVRVKSGQRSVHSLLPW
GLTWPWTLALLLSVPLVPSASW
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctgtgaagccagaggcaaccctgtacctgtatacagttggttcatcaatgga
acagtagtggaggcagagaaccgttacagcttgatcgacggcaacttgataataaccaac
gccagcgagacggcagactatgggagataccagtgtaaggcggagaacagctatgggacg
gtcctgagtcgggatgcactgctacagtttgcctatctgggatccttcagtgggaggacg
agaggaggtgtgtctgtaagggaaggacaaggagtggtgctcatgtgtaccccaccccct
cattctccagagatcatgtacagctgggtgttcaacgagttcccatcgtttgtggccgag
gacagccggcggttcatctcccaggtaacgggcaacctgtacgtgtccaaggtgcagcct
agcgacgtgggcagctacatctgtctggtgaagaacacggtgaccaacgccagggtcctc
agcccgcccacgccactcacactcagaacagatggtctaatgggagaatatgagcctaaa
atagaggtgcatttccccctgtctgtcccggctgccagaggagtcaccgtgaggctggag
tgtttcgccctggggaatcccgtcccaaccataacgtggaggaagatgaacggtaacatc
cctaagaaggctcgtctgaggaagtcgcaggctgttctggagatccctaatgtacagctg
gaggactcagggacctacgagtgtaaagcggagaaccccagaggaggaacagcctttaag
ggacacatccaggtctacaccttcccccagtggatcagcacgataaacgacagccagttg
gacagtggagatcagctgcactgggagtgcaaggccacagggaagcctagacccacctac
cgttggctccgcaatggagaaccgctcacaccacagagcagggtggagatggtgaatgga
gagctgattatccagaaggtccaacaggctgactctgggatgtaccagtgtgtcgctgag
aacaaatacggagccatctactgcagcgcagaactcaagatcttagcgtcacccccagtc
ttcagccctaaccctgtccgtctgatcgccacgctggggaaagacatgttgttgggatgt
agaccccgagcatctcccaagcctagagtaacatggaggagaggagacagacgcattcag
cccagcagaaggataatgctgttacgaaacaacacgctgaggatcatcaactccacccgc
tctgacgaggggaactatgtatgtcgagccgagaatcagtttggctcggctgagatgacg
gccatgctctgggtaaaagaggccatgcgtgtggacctgagccccagcagggtggaggtg
acagtgggggagagcgtggtgctcagttgcagggtctcacatgacccgtctctggacgtg
gccttccagtggctcctcaaccagcagcccctcaacttccaacaggagggcagacatttt
gaatatacccaaacacagtcctccacggtggacctgatgatcagaagcatcctgctgaag
catgctgggaaatacggctgccgggctcagaccagcgccgacacggtatttgctgaggct
gaagtcctcgttagaggccccccaggaccccctggtgtggtgatagtagaggagatcaag
gacactacagccaccctgtcttggagtggaggggtggacaaccacagccccatcagcagc
tacaatctccaggcccggagccccttctccctgggctggcagaccctcagaacagaccca
gagccagtgacaggggacatggagtcagccatggctgtggacctgaacccctgggtggac
tatgagttcagggtggtggccagtaacgctatcgggacaggagaccccagtgccccatcc
agaggggtccggactaaagaagcagtcccctcggtggtcccagctaacgtcagcggaggg
aacggccgcaggcatgaactggtcatctcctgggagcctgtgtctgaggagttccagaat
ggggagggctttggctacatcgtggcgttcagagccaatgggacgcgaggatggaaggag
aagatggtgacatcagcagattccactatgtacaagtacagagatgagaccttccctccc
ctcacccccttcgaagtgaaggtgggagtgtacaacaacaagggagacggacccttcagt
ggtgtggtcactgtgtactctgcagagggggagcccagagaggccccatctgaggtgaaa
gcttccagcatttcctcttcggaaatcaaagtaacttggaggccacccaaccctggccct
gggagaccacgggggtacgaggtgagcttcaggaaggacagtgaccaggaggagtcaggg
aaccggaagaagacagcggggaacgagacgtctatgttgctgacaggcctggaggggaac
agcgtgtacctcatcacagtcagaggcttcaacagtatcggccagggccctgcatcgacc
actagcaccgccaagaccaagaaagaccctccagtccagcctcccgccaaccttgtgtgg
attcaggaagggactaacgtatcattaaactgggacccggtcaagtctaaagacaacgag
tcagatgtcataggatacaaggtgttgttgagtcaggaggggcgtgtccacaatcaggtg
atgaggactatcaccccatcggccgtcctctctctcccggagggaggcacctacatcatt
gaggtgcgggctttgagtgaggggggagagggagcaatcagctcccaagtcagagtactc
acctcttcaggtgtccgggtgaagagtggccagcgttcggttcacagcctgctaccatgg
ggtctgacatggccatggactttggcgttgctcctctctgttcctctcgtgccttcagct
tcctggtga
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