Oncorhynchus masou masou (cherry salmon): 135553396
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Entry
135553396 CDS
T10723
Symbol
dchs1b
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135553396 (dchs1b)
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Cadherin related
135553396 (dchs1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_pro
Cadherin_4
LapA_dom
CADH_Y-type_LIR
He_PIG
Motif
Other DBs
NCBI-GeneID:
135553396
NCBI-ProteinID:
XP_064841607
LinkDB
All DBs
Position
13:complement(65167204..65231356)
Genome browser
AA seq
2808 aa
AA seq
DB search
MTGQAMQVSIIQSGRAKVQDGMQAQGQVRQRSVIQSRGNGTGEQSYLVDNSSGHVSLRLP
STRLIEGPTWAPGPRVMLCSCVGTGGAIQTFSQNAEPKRVDTAVTATDADGGSFGSISYS
LGSGINSAVPSQFSVGKETGQICTNVALDRDQGPTSYDFTVTAVDGGGLNSMAYVRVDLL
DINDNRPVFYPVIYAVSLSSQSAPGTSVVKVTALDPDTGENGRVTYRTVPGGNSPFFTLN
KDTGVISLSRSLHGKANTVIPMVVSAQDGGGLAALVNARVNISVVAGLVAPPVFEHSQYS
FTVSEDVLRGTEVGIVQAISKNGVLSKDILYSISSGDPAGYFTVDPESGALRTSLPLDHE
AQPSLTLELQARSGSPPAFGQTHVHITIQDINDNTPVFLPSSSESLLLPEQTKMGTMVYR
VQAQDRDSGINGQVTFDLSSTATSSGGQRTFSMERSTGEIRLVGELSYDVTPRYDLTVTA
KDGGAPQLSSTMMLVVHVQAENDHGPVFDTLTYRVELRENTPLSTCFLQVRALSRDTAGS
GSSSPLAFHLRPDGDAAGFGIAVDSGWLFVKSALDREVKDMYMLMVLATAGHGQLKKTGS
ATVRVSVTDENDNSPRLIQARAFLAVRENLPAGSGFGRVLATDRDTGLNGRLSYRLLHPD
RHFQINSHTGEISTRVGLDREQQSSYQVLLVVQDGGTPPRSATGTAFITVLDENDNTPSF
RHSQPGKGLTMQVVEGQASGLLLGKVQAKDPDEGENGTVYYSMSGPRAERFSLNPTTGEL
RSSSPLSRSDRAEYSFTVTATDRGQPSHSATCTLHIQVQSVSRAPSKANTLSMSFNSVEE
AKPGSMIGSVRSHDGFELPEAGQVTYTVVGGSDRDGTFMVDRQTGDVYLARELDYERSAR
YTLQIEVDDFSMTLPSSHLVQLDIEVEDSNDHAPRFPGDPVTVVIPENMEPGASIYTFQA
SDQDGSGPNSLLTYSILHQYPDLTDLLVLDPSTGILTLAQELDHEVTSSLILVVQATDSA
LNASQRRWGSVTVRVFVTDENDNAPVFSSPSAVSVMEDQPVGFVVLYVVARDADQGESGR
VSYFIETGNAGGIFSLNPNTGSLSILKAIDREDQDLLNLTIVAQDHGVPALSSSQLLSVQ
VIDVNDQVPWFQENQYQAQITENQPAGITVLVVSASDLDQGTNGQVTYGGISDEGFSIHP
ATGVITTTKALDREAQEQYTLTVYARDGGVPPNFARAAVKIQVLDENDNAPAFSRLYYSL
EVPENMEAVELFTLRAIDLDTGDSGGMTYKITMGDPSGDFRVDRKSGVLSTSRPLDRERR
ARYSLTVTALDGGSPALSSTATVEVTLLDVNDHSPQFTSPSYTTDLSEDVPIGSLVLEVS
ATDLDQGSNSQVLYFLSRGSQGMFTIDQHTGHVITTAPLDRERTASYTFHVCATDSSPAS
PRNSTATVTVYVQDVNDNAPFFIQDPLVINISASSVSSHRVLSTMRAEDRDFGANGSLFY
RFASPVRGFTINSLTGDIQATEKLQGLTQGQRTLIVEAMDQGSPAQSSLGVVVIYIREQT
YRGIRFSRHARDVSLQENAAKGTAVVQTQAQYPDGSRSGISYSIFSGNTLHSFGISSSTG
EIWVQSSMGLDYEETPRLRLVVKAETASSSSFMAVNLILQDVNDNLPRFQLQNYVAYIRE
AQGYHFPIIQVVADDLDQGQNGQVTYSLRSSSLSGLFKIDPLTGSITTAAIMDREIWTQT
KLVVTATDRGTPRLAGSATLTVIIVDLNDNSPTIPLPREIRVPENTLIGSVITQVTGNDV
DSGPALSYTLHLDPSSQGVFGIHRYGGGVSLTTPLDYEERTWYTLTVRATDSKHQTEANL
TILVEDVNDNAPTFTQDLYQVILAEHTPAGSAVVTVTATDRDSGENGRVMYRVMSSTRDI
FYIDPSNGTLFITQQAELDSENPSILVVIESRDMGTPALSSTATVQVQVTDVNDNAPVFH
QSEYRATVSEDGLPGATILTLEAADGDTSRDNCGFDFTIASGNAGNAFQIESSVRFLEGR
GFQTVGSLVLTGEGLDFEAVSSYNLTVVVSDRGVPQRSSAVSALISVTDTNDNPPAFSRA
EYSVVVSEGAATGTEVLSLSATDPDSPAVGKVQYLISSGDETGMFQVDRWTGALKLQRPL
DNERQASHVIIVQATDGQGHYALAPVTVEVKDINDNRPYFPLPILTASVRENQPHNTLVT
MLHAIDQDTGVFGQLRYYMLDKTGEGKDSFLVNQTSGEVRTRSTFDFEKVNLFNFVALAM
DAGNYSATVTIQVYVMGEDEYDPVFSDLEFSFLVPEGAKKGQSIGQVTARDEDEGVDGIV
LYSLADPSPYFQVNASTGVVSLKMDSHVRHMSRAKREVRVMTLDLTAHSPLERSRVATAR
LTVDVTNTSFGLVSDMNLLLVSVIAVSLGAILILIFIAMSLFCVRLRRQRKEQQSRCRPP
ASPGHGTMLHKLEETKVTDTDRNDRIYHQALPGYVSDQTGSGGGGPYPRGGSLDPSHSSG
RGSAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPDSGIQQDADQLSDISCEPNIDAN
QWFKAKKLANLSGTLLAGQVPVYREDGGGYLGVGRGLNISHPKDYAFPVDGKPAVDGSLT
AIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDETATPNPRRPLQHKAKVDPK
PPRIDPPPLITSIAHPGAKTVPVKPAPVKPSVGRSSFPHLSSLRRSPISHEGSPSSVAMS
PSFSPSLSPLAARSPAIIPFGVTQGPSASMISTTEHSMEHIEEAEMRI
NT seq
8427 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcaagccatgcaggtgtcgataatccagagtggtagagcaaaggtacaagac
ggcatgcaggctcaggggcaggtcaggcagaggtcggtaatccagagtaggggcaacggt
acaggagagcagtcctacttggtggacaactccagtggtcacgtctcactgagacttcct
tccaccagactgatagagggcccgacctgggcccccgggccccgggtgatgctctgttcc
tgtgtgggcacagggggggccatccagaccttcagtcagaatgcagagccaaaaagagtg
gataccgcagtgacagcgacagacgcggacggaggctccttcggctccatcagttactct
ctggggtcaggcatcaacagtgctgtcccctcccagttctctgtagggaaggagacagga
cagatctgtaccaacgtggctctggacagggatcagggaccaaccagctatgactttacc
gtcaccgccgtggacgggggcggtctgaattccatggcctatgtcagggttgacctgctg
gacatcaacgacaacagaccagtcttctaccctgtgatctacgccgtcagcctcagctcc
cagagtgcacctggcacctctgtcgtcaaggttacggcccttgaccccgacactggggag
aacgggagggtcacgtaccgaaccgtccccgggggcaactcccccttcttcactctcaac
aaagacacaggtgtgatctccttgtcccggtcgctgcacggcaaggccaacacggtgatc
cccatggtggtttcagcccaggacggagggggtctggcagcactggtcaacgcccgggtc
aacatcagtgtggtggcaggcctggtggcgcccccggtgttcgaacacagccagtacagc
ttcactgtgtctgaagatgtactgcgtgggactgaggttggcatcgtacaggccatcagt
aagaacggcgtcctcagtaaggacatcctgtacagcatctcctctggagaccctgctggc
tacttcaccgtggacccagagagcggagccctgcggaccagccttcctctggaccacgag
gcccagccttctctaaccctggagctccaggctcgtagcggcagcccccctgccttcggt
cagacccacgtccacatcacaatccaggacatcaacgacaacactcctgtcttcctgccc
tcttcttccgagtctctcctcctcccggagcaaacaaagatggggaccatggtctaccgc
gtccaggcccaagaccgggactccggtatcaatggccaggtgacctttgacctttcctcc
accgcaacctcaagcggaggtcaaagaaccttttccatggagcgcagtacaggggagatc
cggctggtcggcgagctgtcgtacgacgtaacgccgcgttacgacctgacggtgacagct
aaagatggcggcgctccccagctgagctctaccatgatgcttgtggtgcacgtccaggcg
gagaacgaccacggtcccgtgttcgacaccctgacctaccgcgtggagctgagggagaac
accccgcttagcacatgcttcctacaggtgcgagctctgagccgggacaccgcgggttca
gggtcctcctctccactggcattccacctgagacctgatggagacgcagcagggtttggc
atcgcagtagacagcggctggctgtttgtgaagagtgccctggacagagaggtgaaggac
atgtacatgttgatggttctggccacggcaggccacgggcagctgaagaagacgggcagt
gccacagtgagggtgtcggtgaccgatgagaacgacaactctccccgtctgatccaggcg
agggctttcctggccgtgagagagaaccttccggcgggttcaggtttcggacgggtgctg
gctacggaccgagacacgggcctcaacggcaggctcagttacagacttttacacccagac
agacacttccagatcaactcacacacaggtgagatcagtacccgtgtaggtctggacagg
gagcagcagagtagttaccaggtgttgttggtggtccaggatggaggtactcccccccgc
agcgctacagggacagccttcatcaccgtcctggatgagaacgacaacactccctccttc
agacacagccagcctggcaaaggactgaccatgcaggtggtggagggccaggcatcaggt
ttactgctggggaaagtacaggccaaggaccccgatgagggagagaacggcactgtgtac
tactccatgtcaggtcccagagcagagcgtttctctctgaaccccactacaggtgaactg
cgttcctcctctcctctgagtcgctctgacagagctgagtacagcttcactgtgaccgcc
actgaccgaggccagccatctcacagcgctacctgtacactacacatacaggtccagagt
gtgagcagagctccttccaaagccaacaccctctccatgtcctttaactccgtcgaggag
gccaaaccaggctctatgattggctctgtgaggtcacatgatggctttgagctccctgag
gccggtcaggtgacctacacggtggtgggcgggtcagaccgagacggaacgttcatggtg
gaccgtcagacaggtgacgtgtacctggcgagggagctggattatgagcgctccgcccgc
tacacactacagatagaggtggatgacttctccatgacgttacccagcagccacctggtg
cagctagacatcgaggtggaggacagcaacgaccatgcaccccgcttcccgggggacccc
gttaccgtggtgatacctgagaacatggagcctggggcgtccatctacaccttccaggcc
tcggatcaggacggatcagggcccaacagcctgctgacctactccatcctgcaccagtac
cctgacctcactgacctcctggtgcttgacccttccactggcatcctgaccctggcacag
gaactggaccatgaggtcacttcctcccttatcctggtcgtccaggcaacagactccgcc
ctgaatgccagccaacggcgctggggctcggtgacggtgagggtgtttgtgacagatgag
aatgacaacgctccagtcttcagctcgccatccgcggttagcgtcatggaggaccagcct
gtgggtttcgtggttctctacgttgtggcgcgagatgccgaccagggggagagcggacgg
gtcagctacttcatcgagacaggcaacgctggagggatattcagcctcaaccctaatact
ggttctctgtctatcctgaaggccatcgaccgagaggatcaggacctgttgaacctgacc
attgtagcccaggaccacggggtaccagcactctcatccagccagctgctgtctgtccag
gtcatcgacgtgaacgaccaggtgccctggttccaggagaaccagtaccaagcccagatt
acagagaaccagcctgcaggaatcactgttcttgtagtgtcggcctccgacctggaccaa
ggtaccaatggccaggtgacatatggaggcatctctgacgagggttttagcatccaccca
gctacaggtgttataaccaccactaaagccctggacagagaggcacaggaacaatacaca
ctgacagtgtatgcccgagacggtggcgtgcctccgaactttgcccgggcggcagtgaag
atccaggtgttggatgagaatgacaacgctccagcattcagcagactgtactacagtctg
gaggtgcctgagaacatggaggctgttgagcttttcaccctcagagctattgacctggac
actggggacagcggagggatgacctacaagatcacaatgggagacccgtcaggtgacttc
cgtgtggacaggaagtcaggtgttctctccacctccagaccgctggacagggaacgtagg
gccaggtacagtctgacagtgacagcccttgatgggggctctccggccctcagcagcacg
gccacagtagaggtcactctcctggatgtcaacgaccacagcccccagttcaccagcccc
agctacaccactgacctctctgaggatgttcctattggctccctggtgctggaggtctct
gctactgacctggaccaagggtctaacagccaggtgctgtacttcctgtcgcgcggctcc
cagggcatgttcaccatcgaccagcacacgggacatgtcatcaccaccgctcccctcgac
cgggaacgaaccgcctcgtacactttccatgtctgcgccacagactcgtcccccgccagc
cctcgcaactccaccgccacggtcaccgtgtatgtacaggacgtgaacgacaacgctcca
ttcttcatccaggaccccctcgtcatcaacatctcagcctccagtgtctcctcccatcgc
gtcctgtccaccatgcgggcagaggaccgggattttggggccaacggctcactgttctac
cgcttcgccagccctgtccggggcttcaccatcaactctctgaccggggacatccaggct
acagagaagctgcagggactgacccagggccagaggactctgattgtagaggctatggac
cagggaagcccagctcagtcctctctaggggtggtggtcatctacatcagagaacagacc
tacagggggatccgcttctcacgccacgctagagacgtcagcctgcaggagaacgccgcc
aaaggtaccgctgtggtgcagactcaggcccagtaccctgatggatcccgtagtgggatc
agttatagcatcttcagcggcaacaccctacactcctttggaatcagctcctccactggt
gagatctgggtacagagctccatggggctggactatgaggagacccctagactccgccta
gtggtgaaggctgaaactgcatcctccagttccttcatggcggtcaacctgatccttcag
gacgtcaatgacaacctgccacgcttccagctgcagaactatgtagcctacatacgagag
gcacagggatatcatttccctatcatacaggtggtggctgatgacctggaccagggccag
aatggtcaggtgacttacagcctgaggtcgtcgtctctcagcggtctgttcaagatcgac
ccgctgaccggaagcatcaccaccgccgctatcatggaccgagagatctggacacaaacc
aagctggttgttacggcaacggaccggggcacaccacgtttggccggctcggctaccctc
acggtgataatcgtggacctcaatgacaatagtcctacaatccccttgccgcgcgagatc
agagtgccagagaatactctgattggctcggtaataacccaggtgactggaaacgacgtt
gactcaggcccagccctgtcctacaccctccacctggacccgtcctcccagggcgtgttt
gggatccaccgctacgggggcggggtgtctctgaccacccctctggactacgaggagagg
acctggtacacgctgactgtcagggctactgactccaaacaccagactgaagctaacctc
accatactggtggaggatgtcaatgataacgctcctacgttcacacaggatctttaccag
gtgattctggcagagcacaccccagctggcagtgcagttgtcactgtgacagccacggac
cgcgactctggagagaacggccgtgtcatgtacagagtgatgtcatcaacccgggacatc
ttctacattgaccccagcaatggtaccctgttcatcacccagcaggcagagttagactct
gagaacccttctatcctggtggtaatagagtccagagacatgggaacaccagccctctcc
tccaccgctactgtacaggtccaggtgactgacgtcaacgacaacgcgcccgtcttccac
caatcagagtacagagccacggtgtcggaggacggcctcccgggcgccaccatcctgacc
ctggaggcggccgacggcgacacgtcacgcgacaactgcggcttcgacttcactatagct
agcggaaacgcaggcaatgccttccagattgagagcagtgtacgcttcctagaaggacgg
ggcttccagacagtaggcagcctggtattgaccggtgaggggctggactttgaggcggtg
tccagttacaacctgaccgtggtcgtgtcagaccgcggcgtgccccagaggagctcggct
gtctctgcgctgatcagtgtgacggatactaatgacaaccctccggcgttcagcagggca
gagtacagtgtggtggtgagtgaaggagcagccacagggactgaggtcctcagcctgtct
gcaacagacccagactccccggccgtagggaaggtgcagtacctgatcagctctggggat
gagacgggcatgttccaggtagaccgctggaccggagccctgaagctgcagagaccactg
gataacgagagacaggcatcccatgtgatcattgtgcaggcgacagatggacagggtcac
tatgcgctggctcctgtcactgtggaggtgaaggacattaatgacaacagaccttacttc
cctttgcccatcctcaccgccagcgtcagagagaaccagcctcacaacacccttgtcacc
atgctgcacgccatcgaccaggacacgggagtcttcggacagctgaggtactacatgttg
gacaagactggagaggggaaagactccttcctggtcaaccagacgtcaggcgaggtccgg
actcgctccacctttgactttgagaaggtcaacttgttcaactttgtagctctagccatg
gacgcagggaactactctgccacggtgaccatccaggtgtacgtgatgggggaggatgag
tacgaccctgtgttctccgacttagagttctccttcctggttcctgagggggcgaagaag
ggccagagcatcggtcaggtgacagccagagacgaggacgagggagtggacggaattgtt
ctatactccctagctgacccctcgccctacttccaggtcaatgcatcgactggtgtggtc
tccctgaagatggacagccacgttcgacacatgagtagggccaagagggaggtccgtgtg
atgacccttgacctgacggcccacagccctctggagaggtcccgcgtggccacggcccgc
ctcaccgttgacgtgacaaacacatctttcggcctggtgtcggacatgaacctgctgctg
gtcagtgtgatcgctgtgtccctgggagccatcctcatcctcatcttcatcgccatgtct
ctgttttgtgtgagactgagacgtcagaggaaggagcagcagagtcgctgcagacctcca
gcctctcccggccacggcaccatgctacacaaactagaggagactaaagttaccgacact
gaccggaacgaccgcatctaccatcaggccttaccagggtatgtttccgaccaaacaggg
agtggagggggagggccatacccccgcgggggctccctggacccatcccactccagcggg
cgtggctcagcggaagcggcggaggacgatgagatccggatgatcaacgagtacccccgt
gtctcctccatctcttcatccatgcaagaacacatctcagcccgcgggccagactctggt
atccagcaggacgctgaccagctgtctgacatctcgtgtgagcccaacattgacgccaac
caatggtttaaggccaagaagctggccaatctcagtgggactctgctggctgggcaggtg
cctgtctacagggaggatggaggaggttatctgggggtagggagggggctgaacatctcc
caccctaaagactatgccttcccagtggatggtaaacccgctgtggatggctccctcaca
gccatagtggccagtgacgaggagctgaggggtagttataactgggactacctgctgaac
tggtgtccacagttccagccattagcaagcgtcttcacggagatagcgaggttaaaggat
gagacggccactcctaaccctcgcagaccgctccagcacaaagccaaggtggaccccaaa
ccccctcgcattgaccccccgcccctaatcacctccatagcccaccccggggcgaagaca
gtcccggtcaagcctgctcctgtcaagccctctgtggggaggtcctccttcccccacctg
tcctccctacggaggtcccccatcagtcacgagggctccccctcctcagtagccatgtcc
cccagcttttccccctccctgtcccccctggccgcccgctccccggccatcatacccttc
ggggtcacccagggcccctcagcctccatgatcagcaccactgaacacagcatggagcac
attgaagaggccgagatgaggatatag
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integrated database retrieval system
