Oncorhynchus masou masou (cherry salmon): 135554012
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Entry
135554012 CDS
T10723
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03266
Virion - Herpesvirus
omm04081
Hormone signaling
omm04145
Phagosome
omm04148
Efferocytosis
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
135554012
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
135554012
04512 ECM-receptor interaction
135554012
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135554012
04148 Efferocytosis
135554012
09144 Cellular community - eukaryotes
04510 Focal adhesion
135554012
09142 Cell motility
04820 Cytoskeleton in muscle cells
135554012
04810 Regulation of actin cytoskeleton
135554012
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135554012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135554012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135554012
04515 Cell adhesion molecules [BR:
omm04515
]
135554012
04090 CD molecules [BR:
omm04090
]
135554012
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135554012
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135554012
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135554012
CD molecules [BR:
omm04090
]
Proteins
135554012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
135554012
NCBI-ProteinID:
XP_064842079
LinkDB
All DBs
Position
14:complement(5084753..5103573)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGGLEFPFSTLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFNVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPDDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVTEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacgtctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggggctagag
ttccccttcagtaccctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtctccatatatgtacacctaccctgaggaagcaatcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaagtgtctcgaaac
agagactctccagagggaggctttgacgcagtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgctggtgttcactaccgacgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtgatg
cccctctaccagaactacagccagctgattcctggcaccacggttggaacgctgtcggat
gactccgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaatgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcaatgtggaagcaaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggatgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgcagccccaaacctgatgaccccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccatactagtggctttggaaag
gtgtggggcaagtactgcgaatgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcgggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagcccggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcacggagcctgactgtcctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga
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