Oncorhynchus masou masou (cherry salmon): 135554515
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Entry
135554515 CDS
T10723
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135554515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135554515
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
135554515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
135554515
NCBI-ProteinID:
XP_064842927
LinkDB
All DBs
Position
14:21300657..21312651
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AA seq
538 aa
AA seq
DB search
MASLGGSSSSSTEYIVRVPKNTSKKYSIMAFNSGDKVNCSSWTQARMERDMSNRRMYGVE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGTKKGGITE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDDDEEGEKGGKKKKKKGGRGGDLRIHDLEDDLELSSDESDSSGGEDGDSK
PKKKEGDVKGKGKKKKKKRGSDSEANEDSDDGDFEGLEVDYMSDESSSEEEVGEEKAKSN
KEAVPKGIDEASESEEESEEEKQNEEEGKEEEEEEEGKKTPVQTKKKRDSSGESDTSEDS
DIDGEAASALFMKKRTPPKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQG
KRQVVGGSSESPAAKRLKMESSSTAVTTQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAV
RRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcattgggtggaagcagttcctcttctacagagtacatagtccgggtccccaag
aacaccagtaagaagtacagcatcatggcctttaactctggggacaaagtaaactgctcc
tcctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtgtggag
gagactgaggagggggcggcaggcagtgagtttgggaagaagcagagggaggaggcacgc
aggaagaagtttggaatcgttaccagggagttcaaggtggaggaccaaccctggatcctc
aaggtcaacggcaaggcagggaagaggttcaagggtacgaagaaagggggcataacggag
aatgcgtcctactacatctttacccagtgtcctgacggggcctttgaggccttccccgtc
aacggttggtacaacttcgtgccccaggccaaacaccgcacgctgaccgccgaggaggca
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgcctgcgggagcaggagagagggccggacgatgacgacgaggagggcgagaaggggggg
aagaagaaaaagaagaagggaggaagaggaggggacctgcgcatccatgacctggaggat
gacctggagctgagcagtgatgagagcgacagcagtggaggagaagatggagacagcaag
cccaagaagaaagagggggatgtgaaggggaaggggaagaagaagaagaagaagaggggc
agtgacagcgaggctaatgaggacagtgacgatggagactttgagggcctggaagtcgac
tacatgtcagatgagagcagttcagaggaagaggtcggcgaagagaaggccaagtccaat
aaagaggccgttcccaaaggaatcgacgaggcatcggagagtgaggaagagagcgaggag
gagaaacagaacgaggaagaggggaaagaggaggaggaggaagaggaagggaagaagacc
ccagtccagacaaagaagaagagagacagcagcggtgagtcggacacttcggaggacagc
gacatcgatggagaggcagcctccgctctcttcatgaagaagcgtactcctcctaagcgc
ggtggtgggcgtggctctggaggcagctccaggactggcagtcgccctggaacaccgtcc
atagactccgcctccacctccaacacactccgagccgccgctagcaaactggagcaaggt
aagagacaggtggtgggtggaagctctgagtctccagctgccaagaggctgaagatggag
tccagcagtacggctgtcaccacccagagtcctgtcccctcagggaagagcacgccacag
cccccctcaggcaaatcaacccccagttccagtgacgttcagctgacggaggaggcggtg
cgtcgctacctgatccggaagcccatgaccaccaaggaccttctgaagaagttccagacc
aagaggactggcctgagcagcgagcagacggtcaacgtcctggcccagatcctcaaacgc
ctcaaccccgagaggaagaacgtcaacgacaagatgcacttctacctcacagagtaa
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