Oncorhynchus masou masou (cherry salmon): 135554820
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Entry
135554820 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135554820
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omm04054
]
135554820
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
135554820
Protein kinases [BR:
omm01001
]
Serine/threonine kinases: Other
TAF1 family
135554820
Pattern recognition receptors [BR:
omm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135554820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
AAA_16
nSTAND3
RsgA_GTPase
AAA_11
ABC_tran
Motif
Other DBs
NCBI-GeneID:
135554820
NCBI-ProteinID:
XP_064843340
LinkDB
All DBs
Position
14:38839833..38853323
Genome browser
AA seq
1097 aa
AA seq
DB search
MCSYPPGSLSDCASQALSPPSASPLSPRTEEYIHQAKAHLRGMCQEMEAGLSLATHYVDV
RLVQRQILIGSGKNSSKCLEKDLVVIGDAERRRGSLARSQVFESSTGAKPKRSIVLLGNA
GMGKSTLIKKLCVDWSDGLLPQFDFVFLLDGKALTLPPEPTYSLRSLLLHLSCPHPRDVF
NQVLSAPERVLVIFDGFEVVRDLEGLLQFPADDSKGENYSVRQLFSGLLQGKLLPGCSLL
LSARPQGTVSGLLRRADSLLELSGFSPPDIERYLGQYFSGQSLEAPTSVPDSIPVPTSVL
APVPVPVPVPTSVPVPTSVPVPVPLPVPTSVPVPVSLPVPTSVPVPVPVPISVPVPVPTS
VPVPTSVPVLALTRLHSQPYLLSVCWNPALCHMVCLLLEHWDVSEPLPSTLTGLCYRVLL
LKMGRHILKRTHCQSLPQTQTQAHTHTLKHSQKHVLKRTHCQSLPQTQTQAHTHTLKHSQ
KDVLKHTSNWTRTHIRTRSHTQSQNQLEDQKRTIEKREEEEREREGEKEREEKREEGEEE
REEKREEEEREREEGEEEREEKREEEVRERERGREREREGGGRGRERDGGGRERERGREQ
VCSVRVEQSAWQGVKGHSSLLTLDNTVCVRLRMFGLRTGLVHSHWLRGEQGRDCDGGGGG
VSSDNILSWAHPFLQSFLGGAHLSVSSCVSDRALLTQILPQPRGRRRPQGECLDLAQRFA
VGLLFRNNAELRHLATLDTDAMKVVAAKRAAVTSHLENLRHGDLSPARLLEACHCVYETG
DVLLVRHLVRNLPEVLSFQGVPLCPADAFVVWNLLDQCRTLRRRFCLGLEDTGLRMTGLK
LLTGLNNIHSYRASIADTITLWEELEQSGEEELLKAAVSKLTLNPFRATQVSHVQHLSTL
VNIHTSRRLSESQSDGVLGEGLPAVRDLHKLEFELGPVNGPLALPKLLELLPALHSLHHL
DLENSKLGDSGAEGLAGAVLSLSSLQIINLSQNCIGDQGIGSLAPALSTLPSLHCLSLYS
NVISDGGAESLAAVLPQMTSLSDLDVKYNSFTALGAQSLASSLRDCPWIKSLGMWNVCIP
YGVLERLQQQDPRIQLL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcgtatcctcctgggtctctgtctgactgtgccagccaagccctgtctcccccc
tctgcctcccccctctcccccaggacagaggagtacattcaccaagccaaggctcacctg
aggggaatgtgccaggagatggaggcgggccttagcctggcgacccactatgttgacgtg
cgattggtccagaggcagatcctgattggctcagggaagaacagcagcaagtgcctggag
aaagatttggtcgttatcggagacgcggagaggaggcggggctcgttggccaggagtcag
gtgtttgagagctccaccggggcgaaacccaaacgttccatcgtgttgctaggcaacgcc
ggcatgggtaaaagcacgctcatcaagaagctctgcgttgattggtccgacggcctcctg
ccacagtttgactttgtgttcttactggacggtaaggctctgaccctcccccctgagcca
acctatagccttcggtccctcctcctacacctctcctgtccccacccacgggatgtcttc
aatcaggtcctctctgccccggagcgtgtgctggtgatattcgatggcttcgaggtggtg
cgtgacttggaggggctgcttcagtttccagcggatgacagtaaaggggagaactacagc
gttagacagctgttctcaggtttgctccaggggaagctcctaccaggctgctcactgctc
ctctctgcccgaccacaaggcaccgtcagtgggctgctgagacgggctgacagcctcctg
gaactctctggcttctcccctccggacatagagagatacctgggacaatacttctctgga
cagtcgctagaggccccaacctccgtcccagactcaatcccagtcccaacctcagtccta
gcaccagtcccagtcccagtcccagtcccaacctcagtcccagtcccaacctcagtccca
gtcccagtcccactcccagtcccaacctcagtcccagtcccagtctcactcccagtccca
acctcagtcccagtcccagtcccagtcccaatctcagtcccagtcccagtcccaacctca
gtcccagtcccaacctcagtcccagtcctagccctcaccaggctccacagtcagccgtac
cttctgtctgtgtgttggaacccagctctgtgtcacatggtctgtctgcttctagaacac
tgggatgtttcggagccactcccctccacgctgacgggactgtgttacagggtgttgctc
ctaaagatgggacgacacatccttaaacgcacacactgtcaatccctaccccaaactcaa
acccaggcacacactcacacccttaaacacagtcaaaaacacgtccttaaacgtacacac
tgtcaatccctaccccaaactcaaacccaggcacacactcacacccttaaacacagtcaa
aaagacgtccttaaacacacaagcaactggacacgaacacacatccgcactcgctctcac
actcaatcccaaaatcaattagaagaccagaagaggacgatagagaagagggaggaggaa
gagagagagagggagggagagaaagagagagaggagaagagggaggagggagaggaagag
agagaggagaagagggaggaggaagagagagagagggaggagggagaggaagagagagag
gagaagagggaggaggaagtgagagagagggagagggggagagaaagagagagagaggga
ggagggagaggaagggagagagacggaggagggagagaaagagagagaggaagagaacag
gtgtgttctgtcagagttgagcagtctgcttggcagggggttaaaggtcattcatctctc
ctgactctggacaataccgtctgtgtcaggctgcggatgtttggcctgaggactggactg
gtccattctcactggctgaggggggagcagggcagagattgtgacggtggcggtggcggc
gtgagttccgacaacatcctgtcctgggcccaccctttcctgcaaagcttcctgggcggg
gcccacctgtccgtctccagctgtgtgtctgaccgggctctgctgacccagatactacca
cagcccagggggaggcgacggcctcagggagagtgtctggaccttgctcagcgattcgcc
gtcgggctgcttttccggaacaatgcagaacttcggcacctggccaccctggataccgac
gccatgaaagtggtggcggccaagcgagccgctgtgacatcacacctggagaaccttcgc
catggcgacctgagccccgctcggctcctggaggcgtgtcactgtgtttacgagacgggc
gacgtcctcctggtcaggcacctggtacggaaccttcccgaggtcctgtcgttccaaggg
gtcccgctgtgccccgccgacgccttcgtagtgtggaaccttttggaccagtgtagaacg
ctgaggaggaggttctgtctggggctggaggacacaggactgaggatgacaggattaaaa
ctactgacgggtctcaacaacatacactcatacagggcgagtatcgctgacaccatcact
ctgtgggaggagctagagcagagtggggaggaggagcttctgaaagcggcggtgtccaag
ttgacccttaaccctttcagagccacacaggtgtcccacgtccaacacctgtccacactg
gtcaacatacacacaagcaggagactgtctgagagccaatcagatggtgtcctgggggag
ggtcttcctgcagtcagagatcttcacaagctggagtttgagttggggccagtgaatggt
cctctggcgctccctaaactcctggagctgctgccagccctgcacagtctacatcacctg
gatctggagaacagtaaactgggggacagtggggctgagggtctggctggagctgtgctg
tctctctcctctctgcagattatcaatctctcccagaactgtataggggaccagggaata
gggagtctggctcctgctctgtctaccctcccctcgctgcactgtctcagtctgtacagt
aatgtgatatctgacgggggtgctgagagtctggctgctgttttacctcagatgacatca
ctcagtgacctggatgtcaagtacaacagcttcacggccctgggagctcagagtctggct
tccagtctgagggactgtccatggatcaagagtctggggatgtggaatgtgtgtattccc
tacggagtgttagagagactgcaacaacaggacccacggatacagctgctctag
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