Oncorhynchus masou masou (cherry salmon): 135555272
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Entry
135555272 CDS
T10723
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135555272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135555272
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
NGL family
135555272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
LRR_14
Ig_3
LRR_9
ig
V-set
Ig_2
Ig_6
LRRNT
Syndecan
Motif
Other DBs
NCBI-GeneID:
135555272
NCBI-ProteinID:
XP_064843662
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All DBs
Position
2:11949158..11998836
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AA seq
621 aa
AA seq
DB search
MLITMISSLQRQTMRDPRLRGARSYPLFVLLLALQILAVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFQDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIGPGSF
AGLANLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPASYRGRYIGELEHSYFQCDVPVIVEP
PADRNVTEGMAAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLAVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETVDDSQTPALPPIGWVS
SSTTRGTPVQTRTTERTYTVSVLDLDGEGDRGLEEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQNHQQDPDGPASSMEVITVEEELAGVAAMETHLHLPPLEHYNHYNTYRSTYHHS
HTQEPLLIQASSKDNVQETQI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacaatgatctcctccctccagcgccagacaatgagagatcctaggctgagg
ggggctcggtcctatcccctcttcgtgctactgttggccctccagatcctggcggtggcc
ggcctggtgcgtgcacagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgccggagcctgcgcgatgtccccgacggcatctcaaccaacacacgt
tacctgaatctgcaggacaacctcatccaggtgatcaaggtggacagcttcaagcatcta
cggcacctagaaatcctgcagctgagcaagaaccacatccgcaacatcgagattggcgcc
ttcaacggcctggccagtctcaacaccctggagctgttcgacaaccgtctcaccaccatc
cccaatggggccttcgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
attgagagcatcccgtcgtacgccttcaaccgggtcccctcactgcgaagactggacctt
ggagagctcaagcggctctcctacatctcagatggagccttccaggacctcagcaacctg
cgctacctgaacctgggcatgtgcaacctcaaggagatccccaacatcctacccttggtc
aggctggaggagctagagatgtcagggaaccagatctctgtcatagggcctggctctttc
gcagggctggcgaacttgcagaagttgtggatgatgcacgctcagatccagaccatcgag
aggaactcctttgacgacctccagtccctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgacctcttcacccccctgcaccgcctggagagagtccatctgcac
cataacccctggaactgtaactgtgacatcctgtggcttagctggtggctgaaggagaca
gtgcctgccaacaccagctgctgtgcccgctgccacaccccagccagctacaggggtcgc
tacatcggcgagctagagcacagctacttccagtgcgatgtgcctgtcatcgtggagccg
ccggcggaccgcaacgtcaccgagggcatggcggctgagctcaagtgcagaacgagctcg
ttgacctcggtcagctggctcacccccaacgggtctctggtgacccacggggcgtacaag
gtgcgcctggccgtcctcaacgacgggacgttgaacttcaccaccgtcaccatgcaggac
acggggacttacacctgcatggtgagcaacacggcgggcaacatctctgcctctgccgtg
ctcaacgtcacctcggtggagaacagcggcgtcacctacttcaccacagtcaccgtggag
accacagagacagtcgacgacagccagactcctgctcttccaccgattggctgggtatca
tcctcgaccaccagggggactccagtccagaccaggaccacagagcggacctacaccgtc
tctgttctggacctggacggggagggggaccgcggcttggaggaggtgatgaagaccacc
aagatcatcatcggctgctttgtggccatcacgctcatggccgccgtcttgctggtcatt
ttctacaagatgaggaagcagaaccaccagcaggaccccgatggccccgcctcctccatg
gaggtcatcacagtggaggaggagcttgccggtgtcgctgccatggagacccacttacac
ctgcccccattggagcattacaaccattacaacacttacaggagcacctaccaccactcc
cacacacaggaacctttactgattcaagccagctcaaaagacaatgtgcaagagacacaa
atttga
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