KEGG   Oncorhynchus masou masou (cherry salmon): 135555409
Entry
135555409         CDS       T10723                                 
Name
(RefSeq) THO complex subunit 4-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013  Nucleocytoplasmic transport
omm03015  mRNA surveillance pathway
omm03040  Spliceosome
omm05168  Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135555409
    TREX complex
     135555409
Spliceosome [BR:omm03041]
 Complex C
  Other components
   EJC/TREX
    135555409
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135555409
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 135555409
NCBI-ProteinID: XP_064843880
LinkDB
Position
15:complement(6208158..6211583)
AA seq 267 aa
MSDKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGVGRGAAGGGFGGRGGGS
GPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVP
LDGRPMNIQLVTSQIDTQRRPPMQGMNRGGGGMNRGRGGGFRGMPRGRGAGRGGGRGRGG
RGGSTKPLSAEELDAQLDAYNARMETS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtccgataaaatggatatgtcgctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcgggggc
cgaggtggtgttggccgtggagcagctggtggaggctttgggggccgaggtggaggatcc
ggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatacagc
aggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttcaat
gccagtgttgggggcggcgggggtggcgctggtgtggaaaccggagggaagcttcttgtc
tccaatctcgactttggcgtttcagacgcagatattcaggagctctttgcagagtttggt
acactaaagaaggcagctgttcactatgaccggtcgggcagaagcttaggcactgcagat
gtccactttgagaggaaggcagatgctctaaaagctatgaaacagtacaacggtgtacca
cttgatgggcgtcccatgaacatacaacttgtcacatcacagatcgacacacaaagacga
ccacccatgcagggtatgaaccgaggaggtggtggcatgaacaggggtcgtggtggtggg
tttagagggatgccgagaggacgtggagcaggacgtggaggaggcaggggccgaggtggc
cgcgggggaagcactaagccactttccgctgaagagctggatgcccagctcgatgcctac
aatgccaggatggaaacaagctaa

DBGET integrated database retrieval system