Oncorhynchus masou masou (cherry salmon): 135555418
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Entry
135555418 CDS
T10723
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04148
Efferocytosis
omm04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135555418
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135555418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omm04090
]
135555418
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135555418
04091 Lectins [BR:
omm04091
]
135555418
CD molecules [BR:
omm04090
]
Proteins
135555418
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
135555418
Lectins [BR:
omm04091
]
I-type lectins (Siglecs)
135555418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
Ig_C17orf99
I-set
V-set
Zwei_Ig_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
135555418
NCBI-ProteinID:
XP_064843898
LinkDB
All DBs
Position
15:complement(6251670..6261572)
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AA seq
783 aa
AA seq
DB search
MDSPPLYLPLLRLTCLLTLWQGAGAQSLFTIDSVTLKLDPSGEVTSGTLMNLNCEVSVSH
DQSHPMTHSFNFLRDDVLVYSKNTTESAALHQLNPARAANSGTYKCQVIVQDKSKGSRTH
RLTVTGLQTPVLQVTSQILFEGDEVAATCSAPDESGSLLFHFYQDQEKIKQVRAIGNSVG
TRLELKHAGDKHLRCYFEITMLPDAGRSNNSNTVKVLVKELFITPVMNILPGKDVIEGDI
VEFVCRVVNPPSNVTVFLNKDKRVLKTASISLSHSLRVLAEDSGEYVCKVERGNVQKEAY
ESIKVKELFSKPVLVMKPREVFETELFTLNCDTDRYSHERINIGDVKYSLYRNQVLLTSG
GNYSATAHPSLNGNYSCQAQAQGRGQTKKIFKNSTQIVLKAKVPVSVPLLSVVGGRLILG
KPFQLQCQSDNGSLPITYTLLSPHRQAEFRVVRRPWDLALFNITSIHRSSDIHSFSCKAE
NNPSQPYMESSGDHLRRTATIIEPVSRPVLTLTPKMGDVAEGEDLTLTCTVQRGTPPITY
TWYHTKSALPLLSKTTNDMRLSHSFQGVSREHGGGYYCVTNNPSNDSQRSAMVTVGVKLA
GWKKGLIAAFCILLTVSLIIIILVKKCLLPFRRERTVELSVKPASTKTDETLSLTHGEVN
EAANVTPGVMGRSVWSDHVSGSESDDQTSEETTDVPEPQYTEVHPQEVDPTRAPVKKGTD
TVYSEVRNSNQGESASEQADGQGSVEYAQLNHNDHESEEPEDEPRPEPEPEPEQGSEQDG
QLE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaccactctacctgcctctgctgcggctgacctgtctgctcaccctctgg
caaggggcaggagctcagtcattattcaccatagatagtgtgacactcaaactggaccca
agtggtgaggtaaccagtgggaccttgatgaacctgaactgtgaggtcagcgtcagccat
gaccagtcccaccccatgacacacagcttcaacttcctgcgagacgatgtcctggtctac
tccaaaaacaccaccgaatctgcggcccttcaccagctcaacccggccagggctgccaac
tctggcacttacaagtgccaggtcatagttcaagacaagagcaaaggcagcagaacccac
agactcacagtcacaggcttgcagacgcctgtgctgcaggtgacctcccagatcctgttt
gagggggatgaggtggcagctacctgcagcgccccagatgagtctggctccctgctcttc
cacttctaccaggaccaggagaagatcaagcaggtgagggccattgggaactcagtgggg
accaggctggagctgaagcatgctggggacaaacacctgcgctgttactttgaaatcacc
atgctgcctgacgctgggaggtccaacaacagtaacactgtcaaggtcttggtcaaagaa
ctgttcatcacacctgtcatgaacattcttcctggtaaagacgtgattgagggtgacatt
gtcgagtttgtctgtcgagtcgtgaaccccccatccaatgtgacggtcttcctgaacaag
gacaagagggtgcttaagacagcctccattagtctcagtcattcgctcagagttctggca
gaggactctggggagtatgtgtgcaaggtggaaagaggcaatgtgcagaaagaagcctat
gagagcatcaaagtcaaagagttgttttccaagccagtcctggtgatgaagcccagagag
gtgtttgagacagagctcttcacactgaactgtgatactgaccgctattcccatgagaga
atcaacattggggacgtgaagtactccctgtacaggaaccaggtcctactgacatcagga
gggaactacagtgccacagcacacccctctcttaatggaaattactcctgccaggcccaa
gcccaaggaagaggccaaaccaaaaagatcttcaaaaacagcacacagattgtcctcaag
gcaaaagtgcctgtgtcagtccctcttctgagcgtggtagggggcaggttgatcctgggc
aaacccttccagctccagtgtcagagtgacaatggtagtctgcccatcacctacaccctg
ctgagcccccacagacaagctgagttcagggtggtccgcagaccctgggatctggcactc
ttcaacatcacctccatccacaggagctctgacatccacagcttctcctgcaaagccgag
aacaaccccagtcagccctacatggagagctcaggagatcacctccgacgcactgccacc
atcatagagccagtgtccaggccagtactgaccttgacacccaaaatgggggacgtggct
gagggggaggacctgaccctaacctgcactgtccagcggggcacgccccccatcacctac
acatggtatcacacaaagagtgccctgcccctgctgtccaagaccaccaatgacatgcga
ttatcccactcgtttcaaggtgtcagtagagagcatggaggtggatactactgcgtcact
aacaacccatccaatgacagccagaggagtgctatggtcactgttggagtgaagttggct
ggctggaagaaggggctgatcgcagccttctgcatcctgctcacagtgtctctcatcatc
atcatcctcgttaagaaatgccttcttccattcagaagagagagaacagtggaactgtca
gtgaagccagcaagcactaaaacagacgagactctgagtctgacccatggagaagtcaat
gaggctgccaatgtcactcctggggtcatgggaaggagcgtctggagtgatcacgtctca
ggctcagagtctgacgaccagaccagcgaggaaactactgatgtacctgagccacaatac
actgaggtccatccccaggaggtagaccccaccagagcccccgtgaagaaaggcacagac
actgtgtacagcgaagtgcggaattcgaatcaaggtgagtcagcgtccgaacaagctgat
ggccaaggctcagttgagtatgcccagttaaaccacaatgaccatgagtcagaggaacca
gaggacgaaccccggcctgaaccagagccagaaccagaacaagggtcagaacaagacgga
caacttgaatga
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