KEGG   Oncorhynchus masou masou (cherry salmon): 135555455
Entry
135555455         CDS       T10723                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135555455 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omm03041]
    135555455 (snrpa1)
Spliceosome [BR:omm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135555455 (snrpa1)
 Complex B
    135555455 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    135555455 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_4 LRR_8 CDC27
Other DBs
NCBI-GeneID: 135555455
NCBI-ProteinID: XP_064843970
LinkDB
Position
2:13611014..13614216
AA seq 319 aa
MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLKRLKTLLMNNNRICRVGENLEQALPSMRELILTSNNIQELGDLDPLASVKTLTLLSL
LRNPVTNKKHYRLYVINKIPQIHVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAAVQQPEKKKMGPSPADVEAIKNAIANASSLAEVERLKGMLQAGQIPGREVRQVPP
EMVEVEEEEEEKTEEGNGVEEMEEDVVEEVQGKVEEVQGKVEEVDVKEVDKGEEGEKQES
EEDESEDDDMDEDSPVNGS
NT seq 960 nt   +upstreamnt  +downstreamnt
atggtaaaattgtcggcagagctaattgagcaagctgctcaatacacaaaccccgtgcgc
gacagagagcttgatctgcgaggttacaaaattcctgtacttgaaaaccttggggccaca
cttgaccagtttgataccatcgatttctctgacaatgaaatcagaaaactggacggcttc
cctttgctcaagaggctcaaaacgttgctcatgaacaacaacagaatatgtcgtgttggt
gaaaaccttgaacaggcattgccgagtatgagggagctgatcctcacaagcaacaacatc
caggaattgggtgatttggatccgctagcctcagtgaagacattgacccttctcagtctc
ctaaggaatccagtgaccaacaagaaacactacaggctctatgtcatcaacaaaattccc
cagattcacgtgcttgacttccagaaggtcaagttaaaggagcgtcaggaggcggagaaa
atgttcaagggcaaacgaggtgctcagcttgcaaaggatattgccaagcggaccaaaacg
ttcacccccggagctgctgtgcagcagcctgagaagaagaagatgggaccgtctcccgct
gacgtggaagcgatcaagaatgcaatagctaacgcctcgtctctggccgaggtggagagg
ttgaaggggatgctgcaggctggtcagatccccggacgggaggtcagacaagtccccccg
gaaatggtggaggtggaagaggaagaggaggagaagacagaggaaggaaatggagtggag
gagatggaagaggatgtggtggaggaggtacagggaaaggtggaggaggtacagggaaag
gtggaggaagtagatgtcaaggaggtagacaagggggaggagggtgaaaaacaagagtct
gaggaagatgagtctgaggacgatgatatggatgaagactcaccggtgaacggatcatga

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