Oncorhynchus masou masou (cherry salmon): 135555491
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Entry
135555491 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: putative leucine-rich repeat-containing protein DDB_G0290503
KO
K20478
golgin subfamily B member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135555491
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
135555491
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CEP135_TSGA10_CC
Rod_CreS
CCDC39
ATG16
CCDC89
HmpF
AAA_13
CC_Liprin_beta
PII1_coiled_coil
Tuftelin_like
Filament
Lebercilin
Fez1
CCDC146_CC_N
CCDC18_2nd
Motif
Other DBs
NCBI-GeneID:
135555491
NCBI-ProteinID:
XP_064844046
LinkDB
All DBs
Position
2:13769734..13785867
Genome browser
AA seq
1908 aa
AA seq
DB search
MASDLEQVTKRAASQASESGSADDAQSQVLDWQEMVSEAVTARDRAREEKATMALRMSHM
EEEREVLASRQQELEEELVQARGLTGLHRGGKKMGGTAHQHSLQEDFEFDGKQAFHQDPH
SGGSESTTPMEEGENMGGWWPEYTSPNTGGLRSVVEELELERNQLQEQILGLEDRCQDLE
DRLQLQARIESLQNESERLQGQLASLRSQQSRDAEKHHLLVTSLNEQLKGLSDTQECLET
SLIEKENTLVKTSEKLELIDSLRDSLMEKEAQHKEVAEKLLQSENNLTEVSTKCSTFVKQ
CSELKTSVADLTHKLSVLKDKTQKQEATIKTLQNDLDQTNDELDKLNTTHLEERSQLIHN
LQSCEREIDNLRDVLSDKDKEILALSGNMAEYAEQIMVLKQEIKHKEEDLVRIETALTKS
EREAEIIKDSQNSDQQALYTRTAEVVEQLKDAENELIKAKEEKESRTVEVEELRKQVEED
KRTILELRGEIQQHNVGHRNHLLECETQISSLKEHVTVASQKLQESEGLISQLREASTSS
KTLKDQLQDKEQTYEKELKSVKEERNELNAEVSKHNDDLKTLSNQLEKQTECQVQLKKEM
QEKLETISSLEEKLRAIQEEAEVEQQKFNTELQVRDSEKEKLAKDLQVKLENISNMKKLL
KNMKTEKQQLQADLKEKADELKSQKQLVDELNKKSTAALELNSSLNSQKNGLTEENQRLQ
QDVAGKQKSISEMTDERDSLRNKVSDFETQHSENRKVIEGLLKDREELSVRANELNRVLE
QNKQSISESLFEKTNECSLLTKTLREREETVARLQVQIDSLNTQVDQFHHNIAEKDKFVT
DQNSQVEAQQSQLSQLQETMYLLQEQETALKTGLMEKNTVLQQKSDECSSLQNKLGQQXK
LLSKLQGETKSLKGQCSQLTQCLEEKEETFRQMTQDCENHKAELNKRNESLKSLSSQLGV
MNESSAKLESENTELKTTLENHGAENNKLRDEMEQRQAEVVGLHSHIQALSEQNQQLRAA
YEIRDKELAQQMHVASELDRRVNVTLEQNTNLCSQLNSLTEEKQTLQQELAVQSESISEL
SKEKNLLQDKLSNFEMQHSENCKMIEGLLKDKNELSVAVEELNNVLEQNKQTVSESLLDK
TNKCTNLTKLLRGSEEALAHSQDQVDSLNTQLDQLNNNITEKEKTIKNQNSQLEAQQREL
SQLQETLALLQEQGTTLKSGLSEKDTMLQQKAEEWSSLQNKLNQLQGETKSLEGQCSQLT
QHLEEKEETFRQMTQDCENHKDELNQRNESLKSLSSQLGVINESRAKLESENAELKTTLE
NHSAENKKLREEMEQRQTEILDLRDNIQALNEQNVRLKTELKNSFTEASKKLEEISVLKA
EISNRDSYVSNLTKQLTAACSDRDSLGLNLQQRGESLKQQEMFIKQLQTKSVEGEGQMSQ
AITELQTQAQSLQKSLQDKDVSLHEAEKRLSLLREKFTLESEDFKTQLNSSAETMKQLQG
DLRNAVEQSNQLSGRLEEQEAQLKQKVDDYVSLRTYVSELEDSTTQLRGQVDSLTSESSL
LKETLKEKVKFILEAQSTSSAVSESLNSKLKTKDTECERLKEQVSYLQESVLKLNTKEAE
CECLKEQLSHLQESVSKLNSSLSAQSSEVAQLQQALEERETAVMDQSKALQELQRRADEA
ALFKTQFMESTELVSQLQDQIQEHSTKSASLSQSAEENQSAFVNLQEKYATHLEELQEAR
TMLSQRAEEMSSLNKSLSESNSTVQAAECTIEVLRNESSLLRQDLRQIQTLNVDLSKQKE
DALATHQRSTSTFTVEIERLKSQYLHVAAQVNALTENLEQREMSLHAINSQYTAQVKQAE
QVVSEMQKLEEQNKKLREEIALSKQENQQRLDAAISEKNVCSKKFRNS
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacctggagcaggtcaccaagagagccgcctctcaggccagcgagtcaggt
agcgccgacgacgcccagagccaggtgctggactggcaggagatggtgtcggaggcggtg
acagccagggaccgtgcccgcgaggaaaaggctaccatggccctgcgcatgagccacatg
gaggaggagagagaggtgctggccagccggcagcaggagttggaggaggagctggtgcag
gcccggggtctcacagggctacataggggcggcaagaaaatgggaggcaccgcccaccaa
cacagcctgcaggaggactttgagtttgatggcaagcaggcgttccaccaggacccacac
agtggcggatctgagagcaccaccccgatggaggagggggagaacatgggaggttggtgg
cctgagtacacttcccccaacacaggtggcctgcggtcggtagtggaggagttggagctg
gagaggaaccagctgcaggaacagatcctaggactggaggaccgctgtcaggaccttgag
gaccggctgcagctgcaggctcgcatcgagtccctacagaacgagtccgagagactacag
ggtcagctggccagccttcggagccagcagagcagggatgcagagaaacaccatctcctg
gtcaccagcctcaacgagcagctcaaaggactgagtgacacccaagagtgtctcgaaacc
tcacttatagagaaggagaacacattagtcaagacctctgagaaactggagctcatcgac
agcctccgagattctttaatggaaaaggaggcgcagcacaaagaggtcgccgaaaagctg
cttcaatctgagaacaatctcactgaagtctccacaaaatgcagtacctttgtaaaacag
tgttcagaactgaagacatcggttgcagatctcacacataagctgagtgtgcttaaagat
aagacacagaaacaagaggccacaataaagactcttcaaaatgacctggatcagacaaac
gatgaactggacaagttgaacaccacccatctggaagaaaggtctcagctgatccacaac
cttcaaagctgtgaacgggagattgataacctcagagatgtcctctcagacaaggacaag
gagatcttagccctctcgggcaacatggcggagtacgcagagcagatcatggtgctgaag
caggagatcaagcacaaggaggaggacctggttcgcatcgagaccgccctcactaaatcg
gagcgggaggcagagatcatcaaagactctcagaactcggaccagcaggctctgtacacc
aggacggcagaggtggtggaacagctgaaggatgcagagaatgagctgatcaaggccaaa
gaggagaaggagtcgaggacagtagaggtggaggagctgaggaagcaagtggaagaggac
aagcggaccatcctggaacttcgaggggagatccagcagcacaacgtgggccatcgtaat
catctcttggagtgcgaaactcagatctcttcactgaaggagcatgtgactgttgcttcc
cagaaactacaggagtctgagggtcttatctctcagttgcgggaagcaagtacatccagc
aagacactgaaagaccagctccaggacaaggagcagacgtatgagaaagaactcaaatcg
gtcaaggaggaacggaacgagcttaacgcagaggtgtccaaacacaatgatgaccttaag
accctgtccaaccagctagagaagcagacagagtgtcaggtacagttgaaaaaagagatg
caagaaaaactggagacaatatcctctcttgaggaaaaactcagggccatccaggaagag
gctgaagtagagcaacagaaatttaacacagaactgcaagtcagagattctgaaaaggag
aagttggcgaaagacctgcaggttaaattggaaaatatctcaaatatgaagaagctcttg
aaaaacatgaagactgaaaaacaacaactgcaagctgacctgaaggagaaggcagatgaa
cttaagtctcaaaagcagcttgtagatgagcttaataaaaaatctacggcagctcttgaa
cttaacagcagtttgaactctcaaaagaatggcctcacagaggagaatcagaggttgcaa
caggatgtagctggaaagcagaaatccatttcagagatgacagatgaaagggattctctg
agaaacaaagtctctgactttgaaacacagcattcagaaaacagaaaagtcattgaaggg
cttctgaaagacagggaggagctgagtgttagagccaatgaactgaacagggtcctggag
caaaataaacagtccatttccgagagtctatttgagaaaacaaatgaatgtagtcttcta
actaaaacactcagggaaagggaggagacagttgcccgtttacaggtgcaaattgacagt
ttgaacactcaagtggatcagttccatcacaacattgctgaaaaagacaagtttgtcact
gatcaaaactcacaagtagaggcacagcagagccagctgtcgcaactccaggaaacaatg
tatttactgcaggagcaggagactgccctgaaaactgggctcatggagaaaaacaccgta
ttgcagcagaaatcagatgagtgtagctctttacagaataaacttgggcagcagnaaaag
cttctatccaagctacagggtgagactaaatcacttaaaggacaatgctcacaactgacc
cagtgtctggaagaaaaagaagagaccttcagacaaatgacgcaggactgtgaaaaccac
aaagccgagcttaacaagaggaatgagtcattgaagtcactaagcagtcagcttggtgtc
atgaacgagagcagtgcgaagttggagtctgaaaatacagagctgaaaactactctggag
aaccacggagcagaaaacaacaagctgagggatgagatggaacagaggcaagctgaggtg
gttggcctccacagtcacatccaggcactgagtgagcaaaaccaacaactccgagctgct
tatgagatcagagataaggaacttgcccagcaaatgcacgttgcatctgagcttgataga
agggtaaatgtgactcttgagcagaacacaaacctgtgctcacaactgaacagtctgaca
gaggagaagcagacactgcaacaggaattagctgtacagtcagagtccatttctgaatta
agcaaggagaagaacttacttcaagataaactttccaattttgaaatgcaacattcagaa
aactgcaaaatgattgaagggctactgaaagacaaaaatgagctcagtgtagcagtagag
gaactcaacaacgtcctcgagcaaaacaaacagaccgtttcagagagtttgctggacaaa
acaaataaatgtactaatctcaccaaattgcttagagggagtgaagaggcacttgcacat
tcacaagaccaagttgacagcttgaacacccaacttgatcaactgaacaacaacataacc
gaaaaagagaagactatcaaaaatcaaaactcacaattagaggcccagcagagagagttg
tcgcaactccaggagacattggctttattacaggagcaggggaccacactgaaatctggg
ctatcagagaaagacaccatgttgcagcagaaagcagaggagtggagctctttacagaat
aaacttaatcaactgcagggcgagactaaatcacttgaagggcaatgctcacaactgact
cagcatctggaagaaaaagaagagaccttcagacaaatgacacaggactgtgaaaaccac
aaagacgagctgaaccagaggaacgagtcattaaagtcactaagcagtcagcttggtgtc
ataaacgagagccgtgcgaagttggagtctgaaaatgcagagctgaagaccactctggag
aaccactcagcagaaaacaagaagctaagggaagagatggaacagaggcaaactgagata
ttagatcttagggacaacatccaagcattgaatgaacagaatgtcagactaaaaaccgaa
ctcaaaaactctttcacagaggcatccaagaaacttgaagagatttcagttctcaaggca
gagatttctaacagggacagttatgtgtctaatttaacaaagcaactgacagcagcctgc
tcggacagggatagcttaggtttgaatttgcagcagagaggtgagtccctaaaacagcag
gaaatgtttattaagcagttacaaactaagtcagtagagggtgagggtcagatgagccag
gccatcactgagctgcagacacaagctcagagtcttcagaaaagccttcaagacaaagat
gtttcgctgcatgaggcggagaaacggctgagtctgctcagagagaagtttaccttagaa
tctgaggatttcaaaacccagctgaattcaagtgcggaaacaatgaaacagcttcagggt
gatctgcgtaatgcggtggaacagagtaatcagctcagtgggaggcttgaagaacaagag
gcacagcttaagcagaaagttgatgattatgtgagtttaaggacatatgtttcagagctg
gaggattccaccacacagctcagaggtcaagttgacagcctgacctctgagtcatccctg
ttaaaagagaccctgaaagagaaagtcaagttcatccttgaggcccaaagcacctcctca
gctgttagcgaaagcctaaattcaaaactcaaaaccaaagatacagaatgtgagcgctta
aaagagcaggtttcgtacctccaagagtccgttttaaagctcaataccaaagaggcagaa
tgtgagtgcttaaaagagcagctttcacatctccaagagtctgtttcaaagctcaatagt
agcctcagtgcccagtcctctgaagtggcacaacttcaacaagccttagaggaaagagag
actgccgttatggaccagtcaaaggcccttcaggagctgcagagaagggcagatgaagca
gccctcttcaaaacccagttcatggagagcacagagttggtgtcacaactgcaggatcag
attcaggaacactccactaagtctgcaagcctcagccagtcggccgaggagaaccaaagt
gcctttgtaaatcttcaggagaagtatgctactcatttagaggagctccaggaagctcgg
acgatgctttctcaaagggccgaggagatgtccagtcttaacaagtccctcagtgaaagc
aacagcacagttcaggcagcagaatgcaccatagaggtgctgaggaatgagtcttccttg
ctacgtcaagaccttcggcaaatccaaacactgaatgtcgacctttcaaaacaaaaggaa
gacgcccttgctacccatcaaaggagcacctcaacattcactgtcgaaattgagagacta
aaatctcagtatttgcatgtggctgctcaggtaaatgcactgacagaaaatcttgagcag
agagagatgtctcttcatgccattaacagtcagtacacagcccaggtgaaacaggcagag
caagtagtgtcagaaatgcagaaactagaagagcaaaataagaagctaagagaggagata
gctctgtcaaagcaagaaaatcaacagcggctggatgcagcaatcagtgaaaagaacgtc
tgcagcaagaagttcagaaactcataa
DBGET
integrated database retrieval system
