Oncorhynchus masou masou (cherry salmon): 135555511
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Entry
135555511 CDS
T10723
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03420
Nucleotide excision repair
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135555511
09124 Replication and repair
03420 Nucleotide excision repair
135555511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
omm03051
]
135555511
03400 DNA repair and recombination proteins [BR:
omm03400
]
135555511
Proteasome [BR:
omm03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
135555511
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135555511
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
135555511
NCBI-ProteinID:
XP_064844082
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Position
15:complement(8782968..8789072)
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AA seq
355 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEAPKAPVQDSGSSTSAGPAPAAIPIPPEEPTP
TVAEPPAPASSDLSVEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNP
HRAVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQV
IQQNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEG
APVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttaaaaacactgcaacagcagacaattcaaattgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacacctattaaa
gactacaaaattgacgagaagaattttgttgtagttatggtatctaaggcaaagtctgcc
acagctgcttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgggtcc
tcgacgtctgcgggcccggcccctgcagccatccctatccccccagaggagcccacacct
acagtcgcagagcccccagctccagccagctcagacctcagtgtagaggttcagggggga
gatgcctcctctgccttggtgacaggagcggagtatgagaccatgctgacagagatcatg
tctatgggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccc
catcgggccgtggagtacctcctcactggcattcctagcagtccggtccaagagactaat
cccccagcacagcttcctgcatctgcccgcacaggcacagagacccctactgttgctgag
ggagaaaaccctctggagtttctgcgttcccagcctcagttccagagcatgaggcaggtg
atccagcagaacccctcactgctgccagctctgctccaacagctgggccgggagaaccca
cagctcctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccg
gcgggggaggtaggagacgtgcctgaggtgggggacctgggtgctgcagtggaggaggga
gctccagtcaactacattcaggtcacacctcaggagaaagaagccatcgagaggttaaaa
gcgttgggtttccccgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgag
aacctagcggccaacttcctcctgaaccagggctttgaggatgaatga
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