Oncorhynchus masou masou (cherry salmon): 135555564
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Entry
135555564 CDS
T10723
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135555564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135555564
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135555564
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
Tim54
CDC45
Mpp10
BUD22
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
135555564
NCBI-ProteinID:
XP_064844163
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All DBs
Position
15:9789336..9794790
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AA seq
563 aa
AA seq
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MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNALSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLSVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSIQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDGLNMGDLLGSLSDD
EGEPEEEEEGDEDEDEEEEEGDEDEEEEGDEDEEEEGDEDEEEGDEDEEEEEDSSVNQVS
SPPSVPRSPDAASFLCFPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEE
DEQVKSAVLDSIDAILRKAFTSPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQAL
EYVVRQDYFPQDHIAVLEAFMSR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcactatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcactcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggcgctaatgacagcaggcgccagactgagcgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctt
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggggtaactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtatccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagctatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcatttggggagatcacaggagaagctgcactgctggtggcacaatcagttgagggcaaa
gccacactggagaaactggacttaaatggtaactgcctgggggaggagggctgtgatgat
ctcagagaggtaatggatggcctgaacatgggagacctgctggggtcactcagcgacgat
gaaggggagccggaggaggaggaggagggtgatgaagatgaagacgaggaggaggaggag
ggtgatgaagacgaggaggaggagggtgatgaagacgaggaggaggagggtgatgaagac
gaggaggagggtgatgaagatgaggaggaggaagaggacagcagtgtgaatcaggtttcc
tctcctccgtcagtgccccgatccccagatgccgcctccttcctctgcttcccctccccc
gacaagctgctcaaactgggcaccaagagggccctgctctttgaacagcaggtagatgtg
gctgatgctggtaagacagcggaggctttcctgaaaatctcctctgtgtacaatgaggaa
gatgaacaggttaagagtgctgtcctagacagtattgacgcaattctcaggaaagccttc
acaagcccctccttccaaggttacaactttgtatcatcgctgttagtaatgctgggactc
ctcaagagtgaggacaaggtgaagccggtacatgtggtgcctggtcatttgcaggccctg
gagtacgttgtgcgtcaggactacttcccccaggaccacatcgctgtgctggaagccttc
atgtcccggtaa
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