Oncorhynchus masou masou (cherry salmon): 135555650
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Entry
135555650 CDS
T10723
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135555650 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135555650 (cstf3)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135555650 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
135555650
NCBI-ProteinID:
XP_064844350
LinkDB
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Position
2:14662112..14679929
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AA seq
676 aa
AA seq
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MSTEATADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAVQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LDQSSKLLAEKGDMNNSKVFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRLKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFGRRAEGIKSGRIIFKKAREDMRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAALLQTETVVTPSAPTQKDEADRKPEYPKPDTSQMIPYQPRHLART
YLTPSSTSYNTCLVGTLPLLYLYQLQHMSSRYLTPSSTSTSYNTCLVGTLTPPLPLQHLL
SRYLTPPLPLPATTPV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaagcaaccgccgaccaggcagctgagtatatcccggagaaggttaagaaa
gcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgattcga
gaagcacagaaccaaccaatagacaaagcaaggaagacgtatgaacgacttgtggcccag
ttcccaagctcgggcagattctggaaactattcattgaagcggagatcaaggcaaaaaac
tatgacaaggtagaaaagttgtttcagagatgtctgatgaaagtgctgcacatcgacctg
tggaaatgctacctctcctacgtccgagagacgaaaggaaagctccccagctacaaagag
aagatggcgcaggcgtatgactttgcgctggataaaatcggcatggagatcatgtcctac
cagatatgggtggactacatcaacttcctcaaaggagttgaggcggttggttcatacgct
gaaaaccagcgaatcacggcggtgcgcagggtctaccagaggggctgtgtgaaccccatg
atcaacatcgagcagctctggagagactacagcaagtatgaggagggcattaacgtacat
ctggccaagaagatgattgaggaccgcagcagagactacatgaacgctaggagagtggcc
aaggaatatgagactgtgatgaagggtctggataggaacgccccctcggtgcccccacag
aactccccccaggaggcggtgcaggtggagatgtggaagaagtacatccaatgggagaag
agcaacccgctccgcacagaggaccagacactcatcactaagagagtgatgtttgcctat
gagcagtgtctgttggtgctgggtcatcaccctgatgtgtggtatgaggctgcccagtat
ctggaccagtccagtaaactactggcagagaagggggacatgaacaactctaaggtgttc
agtgacgaagcagctaacatctacgagcgcgccatcggtactctactgaagaagaacatg
ctgctgtacttctcattcgctgactacgaggagagtcgattgaagcatgagaaggtccac
agcatctacaaccgtctgctggccatcgaggacatcgaccccacgctggtctacatccag
tacatgaagtttggccggcgggccgagggcatcaagtcaggccgcatcatctttaagaag
gcccgggaggacatgcgcacgcgtcaccacgtctacgtgactgcagcactgatggagtac
tactgcagtaaggacaaatcagtggcctttaagatatttgaactgggcttgaagaaatat
ggagacattccagagtatatacttgcatacatcgattacctctcacaccttaatgaggac
aacaacaccagagttttgtttgagcgtgttctcacctcgggaagcctgtcgccagagaag
tctggtgagatctgggcacgtttcttggcctttgagagtaacatcggggacctggccagt
atcctgaaggtggagcgcaggcgtttcacggccttcaaggatgagtacgaaggcaaggag
acagccctgctggtggacagatacaagttcatggacctgtacccctgttctgccagcgag
ctcaaagccctcggatacaaggatgtgtcccgtgccaaactggcggcgttgctccagaca
gagacggtggtgactccatcggctcccacgcaaaaggacgaggccgaccgcaaaccagag
taccccaaacctgacaccagccagatgatcccctaccaaccacgacacttggcccgtacg
taccttaccccctcctctaccagctacaacacctgtctagtaggtaccttacccctcctc
tacctctaccagctacaacacatgtctagtaggtaccttaccccctcctctacctctacc
agctacaacacctgtctagtaggtaccttaacccctcctctacctctacaacacctgttg
agtaggtaccttacccctcctctacctctaccagctacaacacctgtctag
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