KEGG   Oncorhynchus masou masou (cherry salmon): 135555724
Entry
135555724         CDS       T10723                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137  Mitophagy - animal
omm04144  Endocytosis
omm04145  Phagosome
omm04148  Efferocytosis
omm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135555724
   04145 Phagosome
    135555724
   04137 Mitophagy - animal
    135555724
   04148 Efferocytosis
    135555724
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135555724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135555724
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135555724
   04031 GTP-binding proteins [BR:omm04031]
    135555724
Membrane trafficking [BR:omm04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    135555724
 Endosome - Lysosome transport
    135555724
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135555724
  Exosomal proteins of other body fluids (saliva and urine)
   135555724
  Exosomal proteins of colorectal cancer cells
   135555724
  Exosomal proteins of bladder cancer cells
   135555724
GTP-binding proteins [BR:omm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    135555724
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 135555724
NCBI-ProteinID: XP_064844484
LinkDB
Position
15:15141527..15163633
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtaggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccccaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatcttcatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa

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